Factsheet for PGSC0003DMT400036487

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050440.2.1	Tomato	extracellular	97.81	97.81
PGSC0003DMT400030402	Potato	extracellular	85.89	85.09
KRH64171	Soybean	extracellular	78.06	77.81
KRH53775	Soybean	extracellular	77.74	77.5
VIT_13s0067g02360.t01	Wine grape	endoplasmic reticulum, extracellular	74.61	74.14
KRH73217	Soybean	nucleus	74.61	73.46
AT5G05340.1	Thale cress	extracellular	73.04	71.91
KRH14872	Soybean	nucleus	73.04	71.47
CDX70158	Canola	extracellular	71.16	69.85
CDX98835	Canola	extracellular	70.53	69.23
CDY14118	Canola	extracellular	70.22	69.14
Bra009105.1-P	Field mustard	extracellular	59.87	68.95
Bra028761.1-P	Field mustard	extracellular	69.91	68.83
CDY04948	Canola	extracellular	69.59	68.52
PGSC0003DMT400068341	Potato	extracellular	63.01	63.61
Bra005850.1-P	Field mustard	extracellular	63.95	62.96
CDY52147	Canola	extracellular	63.95	62.96
CDX80957	Canola	extracellular	63.64	62.65
PGSC0003DMT400040868	Potato	extracellular	61.76	61.76
PGSC0003DMT400052649	Potato	cytosol	43.26	61.61
PGSC0003DMT400018003	Potato	extracellular	51.72	60.44
PGSC0003DMT400053613	Potato	cytosol	47.34	60.4
PGSC0003DMT400053615	Potato	cytosol	47.34	60.4
PGSC0003DMT400078121	Potato	extracellular	58.62	59.94
PGSC0003DMT400053618	Potato	plastid	55.49	59.0
PGSC0003DMT400031195	Potato	cytosol	54.55	58.19
PGSC0003DMT400071003	Potato	cytosol, plastid	52.98	56.33
PGSC0003DMT400050890	Potato	cytosol	44.2	55.95
PGSC0003DMT400053611	Potato	cytosol	31.03	55.31
PGSC0003DMT400017114	Potato	extracellular	43.57	54.72
PGSC0003DMT400039065	Potato	extracellular	53.29	53.29

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102602226	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1B3Q2	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400014055	PGSC:PGSC0003DMG400014055
EnsemblPlants:PGSC0003DMT400036487	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31388	PANTHER:PTHR31388:SF24	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296D134	RefSeq:XP_006361306.1	SEG:seg

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400014055]

Coordinates

chr6:+:31519292..31521502

Molecular Weight (calculated)

34528.0 Da

IEP (calculated)

9.685

GRAVY (calculated)

-0.214

Length

319 amino acids

Sequence
(BLAST)

001: MACFKSAIVL FFLVSLVGSS SAQLTTGFYS KSCPKLYETV KSVVNSAIQK ETRMGASLLR LFFHDCFVNG CDGSLFLDDT STFTGEKRAQ PNFNSARGFE
101: VIDNIKSAVE KVCPGVVSCA DILAVTARDS VVILGGPNWD VKLGRRDART ASQGAANNSI PTPTSNLNRL ISSFSAVGLS TKDMVALSGA HTIGQARCTS
201: FRGRIYNETK NMDASLARTR QNNCPRASGS GDNNLAPLDL QTPTRFDNHY FINLVNKKGL LHSDQQLFNG GSVDSIVKSY SNNPSSFTSD FVTAMIKMGD
301: NRPLTGSKGE IRKNCRRIN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.