Factsheet for PGSC0003DMT400039065

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g018800.1.1	Tomato	extracellular	97.18	97.18
PGSC0003DMT400071003	Potato	cytosol, plastid	88.4	94.0
PGSC0003DMT400050890	Potato	cytosol	64.58	81.75
VIT_01s0010g02010.t01	Wine grape	plastid	67.4	71.19
VIT_01s0010g01980.t01	Wine grape	cytosol, extracellular, nucleus	59.25	71.05
VIT_01s0010g01970.t01	Wine grape	cytosol, extracellular, nucleus	59.25	71.05
VIT_01s0010g01960.t01	Wine grape	cytosol, extracellular, plastid	57.99	69.81
KRG91738	Soybean	endoplasmic reticulum, extracellular, vacuole	70.53	69.66
KRH29155	Soybean	extracellular	70.53	69.66
KRH35030	Soybean	extracellular	70.53	69.66
VIT_01s0010g02020.t01	Wine grape	cytosol, extracellular, nucleus	57.99	69.55
VIT_01s0010g02000.t01	Wine grape	extracellular	69.59	68.52
VIT_01s0010g01950.t01	Wine grape	cytosol, extracellular, nucleus	57.05	68.42
AT1G14550.1	Thale cress	extracellular	63.95	63.55
CDY66455	Canola	extracellular	62.38	62.78
Bra026207.1-P	Field mustard	extracellular	61.76	62.15
CDY65372	Canola	extracellular	61.76	62.15
AT1G14540.1	Thale cress	extracellular	61.13	61.9
CDX81650	Canola	extracellular	61.13	61.71
Bra026822.1-P	Field mustard	extracellular	55.17	61.11
CDY53543	Canola	cytosol, extracellular	42.95	58.3
GSMUA_Achr4P05250_001	Banana	extracellular	52.98	56.71
PGSC0003DMT400068341	Potato	extracellular	55.8	56.33
PGSC0003DMT400031195	Potato	cytosol	51.41	54.85
PGSC0003DMT400053618	Potato	plastid	51.41	54.67
PGSC0003DMT400040868	Potato	extracellular	54.55	54.55
PGSC0003DMT400053613	Potato	cytosol	42.63	54.4
PGSC0003DMT400030402	Potato	extracellular	54.55	54.04
PGSC0003DMT400053615	Potato	cytosol	42.32	54.0
PGSC0003DMT400036487	Potato	extracellular	53.29	53.29
PGSC0003DMT400052649	Potato	cytosol	37.3	53.12
PGSC0003DMT400078121	Potato	extracellular	51.41	52.56
PGSC0003DMT400018003	Potato	extracellular	43.57	50.92
PGSC0003DMT400017114	Potato	extracellular	40.13	50.39
PGSC0003DMT400053611	Potato	cytosol	27.59	49.16

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:M1B7Q8	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400015106	PGSC:PGSC0003DMG400015106	EnsemblPlants:PGSC0003DMT400039065
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388
PANTHER:PTHR31388:SF37	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	UniParc:UPI000295A609	:	:	:	:

Description

Cell wall peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400015106]

Coordinates

chr11:+:11937436..11938727

Molecular Weight (calculated)

34438.9 Da

IEP (calculated)

6.973

GRAVY (calculated)

-0.135

Length

319 amino acids

Sequence
(BLAST)

001: MTTSNKSFVA IFSLLLLSSM QCHAQLSSTF YDRTCPTALT TIRTSIRQAV SSERRMAASL IRLHFHDCFV QGCDASILLD ETPTIVSEKT ALPNLGSARG
101: YGIIEDAKRE LEKTCPGIVS CADILAVAAR DASTLVGGPS WTVKLGRRDS TTASHTLAET DLPGPFDPLD RIISGFANKG LSTRDMVALS GAHSIGQAQC
201: FLFRDRIYSN GTDIDAGFAS TRRRQCPQED QNGNLAPLDL VTPNQLDNNY YKNLIQRKGL LQSDQVLLSG GSTDSIVTEY SNNPRTFASD FSAAMIKMGD
301: ISPLTGQNGI IRTVCGAIN

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.