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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400040868 Potato extracellular 93.75 94.04
VIT_12s0028g01830.t01 Wine grape extracellular 68.12 79.85
Solyc07g055190.2.1 Tomato extracellular 78.12 78.37
GSMUA_Achr7P09390_001 Banana cytosol, extracellular, nucleus 56.88 77.45
VIT_12s0028g01840.t01 Wine grape extracellular 73.75 74.45
GSMUA_Achr6P05580_001 Banana extracellular 55.62 73.86
KRH25796 Soybean extracellular 72.5 72.73
KRH27066 Soybean extracellular 71.56 72.7
KRH55722 Soybean extracellular, vacuole 71.88 72.1
GSMUA_Achr6P21530_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 53.44 71.25
GSMUA_Achr7P09380_001 Banana extracellular 64.06 69.97
GSMUA_Achr10P... Banana extracellular 61.56 69.37
GSMUA_Achr10P... Banana plasma membrane 59.38 68.59
EER88495 Sorghum extracellular 66.56 67.83
Zm00001d046184_P001 Maize extracellular 65.62 67.09
TraesCS7B01G275400.1 Wheat cytosol 27.81 66.92
EER88496 Sorghum extracellular 65.31 66.77
Os06t0547400-01 Rice extracellular 66.56 65.74
TraesCS7A01G353300.1 Wheat extracellular 65.62 65.22
TraesCS7A01G353400.1 Wheat extracellular 65.0 65.2
TraesCS7B01G274900.1 Wheat extracellular 65.31 64.91
TraesCS7D01G369900.1 Wheat extracellular 65.31 64.91
TraesCS7B01G275000.1 Wheat extracellular, vacuole 63.44 64.86
TraesCS7B01G275200.1 Wheat extracellular 63.44 64.86
TraesCS7D01G369400.1 Wheat extracellular 65.0 64.6
TraesCS7A01G352900.1 Wheat extracellular 63.44 64.44
TraesCS7B01G274200.1 Wheat extracellular 64.69 64.29
Os02t0240100-01 Rice extracellular 65.62 64.22
EER89897 Sorghum extracellular 65.94 64.13
Zm00001d046186_P001 Maize extracellular 64.69 64.09
Solyc05g052280.2.1 Tomato extracellular 64.38 63.98
TraesCS7B01G274500.1 Wheat extracellular 63.75 63.75
TraesCS7D01G369700.1 Wheat extracellular 63.75 63.75
Os02t0236600-01 Rice extracellular 63.75 63.55
OQU76535 Sorghum extracellular 63.12 63.52
Os06t0546500-01 Rice extracellular 62.81 63.21
KXG29896 Sorghum extracellular 64.38 63.19
Zm00001d046187_P001 Maize extracellular 63.12 63.12
EER89901 Sorghum extracellular 64.06 63.08
GSMUA_Achr11P... Banana extracellular 55.94 63.03
GSMUA_Achr3P03580_001 Banana extracellular 62.81 63.01
TraesCS7D01G369500.1 Wheat extracellular 62.81 63.01
TraesCS7B01G274300.1 Wheat extracellular 63.12 62.93
TraesCS7A01G353000.1 Wheat extracellular 62.81 62.81
GSMUA_Achr10P... Banana extracellular 56.56 62.63
EES06568 Sorghum extracellular 62.81 62.62
HORVU7Hr1G089320.1 Barley extracellular 62.81 62.62
GSMUA_Achr6P21540_001 Banana extracellular 55.94 62.59
TraesCS7A01G477100.1 Wheat extracellular 62.19 62.58
Solyc06g050440.2.1 Tomato extracellular 62.19 62.38
TraesCS7A01G353200.1 Wheat extracellular 62.19 62.38
TraesCS7B01G379100.1 Wheat extracellular 61.56 62.34
TraesCS7D01G464600.1 Wheat unclear 61.88 62.26
GSMUA_Achr6P14620_001 Banana extracellular 50.94 61.74
Zm00001d016185_P001 Maize extracellular 61.88 61.68
TraesCS7B01G378700.1 Wheat extracellular 61.25 61.64
HORVU6Hr1G026600.2 Barley plastid 62.5 61.54
TraesCS6B01G166200.1 Wheat extracellular, vacuole 62.5 61.54
TraesCS6D01G127100.1 Wheat golgi 62.5 61.54
TraesCS7D01G370400.1 Wheat extracellular 60.0 61.54
TraesCS6B01G063900.1 Wheat extracellular 61.88 61.49
HORVU7Hr1G089310.1 Barley extracellular 61.25 61.25
HORVU6Hr1G009500.3 Barley extracellular 61.56 61.18
TraesCS6D01G054900.1 Wheat extracellular, vacuole 61.56 61.18
Zm00001d053554_P001 Maize extracellular 61.88 61.11
TraesCS6A01G138000.1 Wheat plastid 61.88 60.92
TraesCS6A01G047600.1 Wheat extracellular 61.25 60.87
HORVU7Hr1G089360.2 Barley extracellular 51.88 60.81
TraesCS6B01G063400.1 Wheat extracellular 61.25 60.68
TraesCS6D01G054400.1 Wheat extracellular 61.25 60.68
EES04822 Sorghum extracellular 61.25 60.31
HORVU6Hr1G009360.1 Barley extracellular 60.62 60.25
Os06t0547100-00 Rice extracellular 61.56 60.24
GSMUA_Achr7P05790_001 Banana extracellular 53.44 60.0
Os02t0240300-01 Rice extracellular 60.0 59.81
GSMUA_Achr7P05780_001 Banana extracellular 53.12 59.65
Os01t0205900-01 Rice extracellular 60.94 59.63
TraesCS6A01G047200.1 Wheat extracellular, plastid 60.0 59.44
TraesCS6B01G063800.1 Wheat extracellular, vacuole 59.69 59.32
Solyc05g050880.2.1 Tomato extracellular 58.75 59.31
TraesCS7A01G124200.1 Wheat extracellular 62.81 59.12
TraesCS3A01G136300.2 Wheat extracellular 60.31 59.02
TraesCS6B01G063500.1 Wheat extracellular 59.38 59.01
Zm00001d016177_P001 Maize extracellular 59.38 59.01
TraesCS6A01G047500.1 Wheat extracellular 59.06 58.7
TraesCS6D01G054500.1 Wheat extracellular 59.06 58.7
TraesCS6D01G054800.1 Wheat extracellular, vacuole 59.06 58.7
TraesCS7B01G023300.1 Wheat extracellular 63.44 58.67
HORVU7Hr1G108530.1 Barley extracellular 62.5 58.65
TraesCS6A01G047300.1 Wheat extracellular, vacuole 56.88 58.52
TraesCS3D01G137100.1 Wheat extracellular 59.69 58.41
TraesCS7D01G122000.1 Wheat extracellular 63.12 58.38
KXG29898 Sorghum extracellular 59.38 58.28
TraesCS6D01G054600.1 Wheat extracellular 58.44 58.07
TraesCS7B01G023100.1 Wheat extracellular 63.12 58.05
HORVU7Hr1G089480.2 Barley extracellular 56.88 57.96
TraesCS7D01G370000.2 Wheat extracellular, vacuole 63.12 57.88
KXG29892 Sorghum extracellular 57.5 57.32
Solyc09g018590.1.1 Tomato extracellular 44.69 57.2
TraesCS7A01G124300.1 Wheat extracellular 62.19 57.18
Zm00001d016182_P001 Maize extracellular 57.5 57.14
Solyc06g082420.2.1 Tomato extracellular 55.62 57.05
TraesCS6D01G108400.1 Wheat extracellular 57.81 56.57
TraesCS2D01G103100.1 Wheat extracellular 51.56 56.31
TraesCS6A01G118300.1 Wheat unclear 57.81 56.23
TraesCS6A01G047400.1 Wheat extracellular, vacuole 56.56 56.21
TraesCS6B01G146500.1 Wheat plastid 57.81 55.72
TraesCS6B01G063700.1 Wheat extracellular 54.38 55.41
Zm00001d008898_P001 Maize extracellular 59.06 55.26
TraesCS3B01G154200.2 Wheat extracellular 60.31 54.99
Os02t0236800-01 Rice extracellular, plasma membrane 55.94 54.91
Solyc11g018800.1.1 Tomato extracellular 54.69 54.86
Os02t0237000-00 Rice extracellular 57.81 54.73
HORVU6Hr1G010340.1 Barley extracellular 56.56 54.35
Solyc10g076240.1.1 Tomato nucleus 53.75 54.26
HORVU7Hr1G077880.1 Barley extracellular 54.69 54.18
OQU84691 Sorghum extracellular 56.25 53.57
TraesCSU01G113200.1 Wheat extracellular 56.88 53.22
TraesCS6B01G071200.1 Wheat extracellular 55.62 52.82
Solyc10g076190.1.1 Tomato extracellular 52.81 52.81
Solyc10g076210.1.1 Tomato extracellular 52.5 52.66
TraesCS6A01G052800.1 Wheat extracellular 55.0 52.54
Solyc10g076220.1.1 Tomato extracellular 52.19 52.35
HORVU3Hr1G026010.4 Barley plastid 59.38 52.05
HORVU6Hr1G021520.1 Barley plastid 57.5 47.42
EES00088 Sorghum plastid 58.44 46.06
Solyc10g075120.1.1 Tomato extracellular 31.25 45.66
GSMUA_Achr2P15480_001 Banana extracellular 57.81 15.31
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1ncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0006950
GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491
GO:GO:0020037GO:GO:0042744GO:GO:0046872GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bacInterPro:IPR002016UniProt:K4BF11PFAM:PF00141PRINTS:PR00458PRINTS:PR00461
ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF5InterPro:Peroxidase_pln
InterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseSignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g025380.2
EnsemblPlants:Solyc03g025380.2.1TMHMM:TMhelixUniParc:UPI0002768ACESEG:seg::
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4BF11]
Coordinates
chr3:+:2813769..2816283
Molecular Weight (calculated)
34379.7 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.067
Length
320 amino acids
Sequence
(BLAST)
001: MVSLNRNLIL AFLCVLLCFV VSFSNAQLSA NFYGTSCPNL QTIVRNAMTQ AVNREARLGA SILRLFFHDC FVNGCDASIL LDDTSTFIGE KNANPNRNSA
101: RGYEVIDTIK TQVEAACPNV ISCADILALA AREGTVLLGG PSWAVPLGRR DARTASQSAA NTQIPAPSSS LATLISMFSA KGLSARDMTA LSGSHTIGQA
201: RCTTFRNRIY NDTNIDPQFA ATRRATCPAS GGDANLAPLD IQTPNRFDND YYQNLVVRRG LLHSDQELFN GGSQDALVRS YSNNGASFRS DFAAAMVKMG
301: NISPLTGTNG EIRTNCRAIN
Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)
001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN
Arabidopsis Description
PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.