Factsheet for TraesCS6A01G118300.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G108400.1	Wheat	extracellular	93.92	94.5
TraesCS6B01G146500.1	Wheat	plastid	94.83	93.98
HORVU6Hr1G021520.1	Barley	plastid	93.62	79.38
KXG29892	Sorghum	extracellular	74.47	76.32
Os02t0236800-01	Rice	extracellular, plasma membrane	73.86	74.54
Zm00001d016182_P001	Maize	extracellular	71.43	72.98
VIT_12s0028g01830.t01	Wine grape	extracellular	51.98	62.64
Solyc03g025380.2.1	Tomato	extracellular	56.23	57.81
TraesCS6A01G138000.1	Wheat	plastid	56.84	57.54
TraesCS2A01G108400.1	Wheat	cytosol	38.3	57.27
VIT_12s0028g01840.t01	Wine grape	extracellular	54.71	56.78
KRH25796	Soybean	extracellular	55.02	56.74
TraesCS7A01G477100.1	Wheat	extracellular	54.71	56.6
PGSC0003DMT400040868	Potato	extracellular	54.71	56.43
KRH55722	Soybean	extracellular, vacuole	54.71	56.43
TraesCS7A01G352900.1	Wheat	extracellular	53.5	55.87
GSMUA_Achr7P05780_001	Banana	extracellular	48.33	55.79
GSMUA_Achr7P05790_001	Banana	extracellular	48.02	55.44
KRH27066	Soybean	extracellular	52.89	55.24
TraesCS7A01G353400.1	Wheat	extracellular	53.5	55.17
PGSC0003DMT400052649	Potato	cytosol	37.39	54.91
TraesCS5A01G148600.1	Wheat	extracellular	53.19	54.52
TraesCS7A01G353300.1	Wheat	extracellular	53.19	54.35
TraesCS2A01G107200.1	Wheat	extracellular	51.37	53.99
TraesCS4A01G196000.1	Wheat	extracellular	52.28	53.92
TraesCS7A01G353000.1	Wheat	extracellular	52.28	53.75
TraesCS7A01G353200.1	Wheat	extracellular	51.98	53.6
TraesCS3A01G136300.2	Wheat	extracellular	52.89	53.21
TraesCS2A01G107800.1	Wheat	extracellular	50.76	53.18
TraesCS4A01G196300.1	Wheat	unclear	51.67	52.96
TraesCS6A01G047200.1	Wheat	extracellular, plastid	51.98	52.94
TraesCS7A01G124200.1	Wheat	extracellular	54.71	52.94
TraesCS2A01G107600.1	Wheat	extracellular	50.46	52.87
TraesCS2A01G108000.1	Wheat	extracellular, vacuole	50.76	52.85
TraesCS6A01G047600.1	Wheat	extracellular	51.67	52.8
Solyc07g055190.2.1	Tomato	extracellular	51.06	52.66
TraesCS2A01G108700.1	Wheat	extracellular	51.37	52.65
TraesCS6A01G047500.1	Wheat	extracellular	51.06	52.17
TraesCS2A01G108100.1	Wheat	extracellular, plastid	49.54	51.58
TraesCS4A01G127900.1	Wheat	golgi	50.15	51.56
TraesCS7A01G124300.1	Wheat	extracellular	54.41	51.44
TraesCS2A01G107300.1	Wheat	extracellular	52.28	51.34
TraesCS4A01G136600.1	Wheat	extracellular	50.76	51.07
TraesCS6A01G047400.1	Wheat	extracellular, vacuole	48.02	49.07
TraesCS2A01G108600.1	Wheat	extracellular	46.5	49.04
TraesCS5A01G550600.1	Wheat	extracellular	46.2	48.56
TraesCS5A01G550500.1	Wheat	extracellular	46.2	48.56
TraesCS5A01G550400.1	Wheat	extracellular	46.2	48.56
TraesCS5A01G550300.1	Wheat	extracellular	46.2	48.56
TraesCS2A01G108500.1	Wheat	extracellular	47.72	48.31
TraesCS6A01G047300.1	Wheat	extracellular, vacuole	45.59	48.23
TraesCS2A01G108300.1	Wheat	extracellular	47.42	48.0
TraesCS2A01G107700.1	Wheat	extracellular	45.9	47.34
TraesCS2A01G107500.1	Wheat	extracellular	48.33	46.9
TraesCS6A01G052800.1	Wheat	extracellular	47.72	46.87
TraesCS2A01G509800.1	Wheat	extracellular	45.59	46.44
TraesCS2A01G106700.1	Wheat	extracellular	45.29	46.42
TraesCS2A01G108200.1	Wheat	plastid	44.07	41.31

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF41	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS6A01G118300	EnsemblPlants:TraesCS6A01G118300.1
TIGR:cd00693	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:89302554..89303723

Molecular Weight (calculated)

34017.4 Da

IEP (calculated)

6.108

GRAVY (calculated)

0.144

Length

329 amino acids

Sequence
(BLAST)

001: MAAFPSVSAA RTRPRPILLL VLAASVVLAR GARAQLSAGF YSASCPTVHG AVRQVMSQAV LNDTRTGAAI LRLFFHDCFV NGCDASLLLD DTATTPGEKS
101: SGPNAGGSTF GFDVIDNIKT QVEAACPGIV SCADILALAA RDSVNLLGGP SWAVPLGRRD ATAPDPDGAR TLPGPDLDLA ALVSAFAAKG LTSRDLAALS
201: GAHTVGMARC VQFRTHVYCD ANVSPAFASQ QRQLCPASGG DASLAPLDPL TPNEFDNGYY RNLMSGAGLL RSDQELFNNG AVDSLVRLYS ANPAAFSADF
301: AASMINLGNV SPLTGASGEI RLDCRKVNT

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.