Factsheet for TraesCS4A01G196300.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G116600.1	Wheat	extracellular	98.44	98.44
TraesCS4D01G116700.1	Wheat	extracellular	98.13	98.13
HORVU4Hr1G022270.1	Barley	extracellular	94.7	94.7
TraesCS4A01G196000.1	Wheat	extracellular	90.34	90.91
TraesCS5A01G148600.1	Wheat	extracellular	73.21	73.21
GSMUA_Achr11P...	Banana	extracellular	61.06	66.22
VIT_06s0004g07770.t01	Wine grape	extracellular	62.62	62.62
GSMUA_Achr5P29600_001	Banana	extracellular	61.99	62.19
CDY71390	Canola	cytosol	49.22	61.72
KRG98178	Soybean	nucleus	61.99	60.67
KRH30136	Soybean	nucleus	60.75	59.27
KRH72792	Soybean	nucleus	59.81	59.26
KRH17144	Soybean	extracellular	59.81	59.26
AT5G58400.1	Thale cress	extracellular	59.5	58.77
Bra020370.1-P	Field mustard	extracellular	57.63	58.54
TraesCS7A01G352900.1	Wheat	extracellular	57.32	58.41
CDY32701	Canola	extracellular	57.94	57.06
AT5G58390.1	Thale cress	extracellular	56.07	56.96
CDY02820	Canola	extracellular	57.32	56.44
TraesCS7A01G353400.1	Wheat	extracellular	56.07	56.43
CDY02817	Canola	cytosol	56.07	56.25
TraesCS7A01G477100.1	Wheat	extracellular	55.45	55.97
TraesCS2A01G108400.1	Wheat	cytosol	38.32	55.91
TraesCS7A01G353300.1	Wheat	extracellular	56.07	55.9
TraesCS7A01G124200.1	Wheat	extracellular	58.57	55.29
TraesCS6A01G138000.1	Wheat	plastid	55.76	55.08
TraesCS6A01G047300.1	Wheat	extracellular, vacuole	53.27	54.98
TraesCS2A01G108700.1	Wheat	extracellular	54.52	54.52
TraesCS7A01G353200.1	Wheat	extracellular	53.89	54.23
TraesCS2A01G108100.1	Wheat	extracellular, plastid	53.27	54.11
TraesCS6A01G047600.1	Wheat	extracellular	54.21	54.04
TraesCS6A01G047500.1	Wheat	extracellular	53.58	53.42
TraesCS2A01G107200.1	Wheat	extracellular	52.02	53.35
TraesCS2A01G108600.1	Wheat	extracellular	51.71	53.21
TraesCS7A01G124300.1	Wheat	extracellular	57.32	52.87
TraesCS2A01G108000.1	Wheat	extracellular, vacuole	52.02	52.85
TraesCS2A01G509800.1	Wheat	extracellular	52.96	52.63
TraesCS6A01G047200.1	Wheat	extracellular, plastid	52.96	52.63
TraesCS2A01G107300.1	Wheat	extracellular	54.21	51.94
TraesCS2A01G107800.1	Wheat	extracellular	50.78	51.91
TraesCS6A01G118300.1	Wheat	unclear	52.96	51.67
TraesCS2A01G107600.1	Wheat	extracellular	50.47	51.59
TraesCS6A01G047400.1	Wheat	extracellular, vacuole	51.71	51.55
TraesCS4A01G127900.1	Wheat	golgi	51.09	51.25
TraesCS7A01G353000.1	Wheat	extracellular	51.09	51.25
TraesCS4A01G136600.1	Wheat	extracellular	52.02	51.07
TraesCS3A01G136300.2	Wheat	extracellular	51.71	50.76
TraesCS5A01G550300.1	Wheat	extracellular	49.22	50.48
TraesCS5A01G550600.1	Wheat	extracellular	49.22	50.48
TraesCS5A01G550500.1	Wheat	extracellular	49.22	50.48
TraesCS5A01G550400.1	Wheat	extracellular	48.91	50.16
Bra006769.1-P	Field mustard	extracellular	56.7	49.86
CDX88673	Canola	extracellular	56.7	49.73
TraesCS2A01G108500.1	Wheat	extracellular	48.6	48.0
TraesCS2A01G108300.1	Wheat	extracellular	48.6	48.0
TraesCS6A01G052800.1	Wheat	extracellular	49.22	47.16
TraesCS2A01G107700.1	Wheat	extracellular	46.42	46.71
TraesCS2A01G107500.1	Wheat	extracellular	49.22	46.61
TraesCS2A01G106700.1	Wheat	extracellular	46.42	46.42
TraesCS2A01G108200.1	Wheat	plastid	47.35	43.3

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF98	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G196300
EnsemblPlants:TraesCS4A01G196300.1	TIGR:cd00693	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:-:478300560..478302737

Molecular Weight (calculated)

34093.7 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.012

Length

321 amino acids

Sequence
(BLAST)

001: MAARAIVVLW LILALVAIAS GGASAQLSSG FYSRSCPGML KAVRSALHPA IARERRVGAS IVRLFFHDCF VQGCDASLLL DDAPGLRGEK NATPNKNSAR
101: GFEVIDAVKA AVEGCCPGVV SCADILAIAA EESVVFLGGP SWEVKMGRRD STTASFNGAE NNIPPPTSGL ANLTSLFAAQ GLSQKDMVAL SGAHTIGLAR
201: CTNFRDHIYN DTNIDAGFAR SRQSGCPRAT GSGDNNLAPL DLETPTVFEN DYYKNLVQKR GLLHSDQELF NGGAADALVR EYVGSQSAFF KDFVEGMIKM
301: GDITPLTGSN GQIRMNCRRI N

Best Arabidopsis Sequence Match ( AT1G14550.1 )
(BLAST)

001: MERFSLRFVL MMVSIILTSS ICQAQLSPTF YDQSCRNALS KIRSSVRTAI ARERRMAASL IRMHFHDCFV HGCDASILLE GTSTIESERD ALPNFKSVRG
101: FEVIDKAKSE VEKVCPGIVS CADIIAVAAR DASEYVGGPK WAVKVGRRDS TAAFKALANS GELPGFKDTL DQLSGLFSKK GLNTRDLVAL SGAHTIGQSQ
201: CFLFRDRLYE NSSDIDAGFA STRKRRCPTV GGDGNLAALD LVTPNSFDNN YYKNLMQKKG LLVTDQVLFG SGASTDGIVS EYSKNRSKFA ADFATAMIKM
301: GNIEPLTGSN GEIRKICSFV N

Arabidopsis Description

PER5Peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Q9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.