Factsheet for Os06t0547400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 19038476
extracellular: 21255809
plastid: 21433289
extracellular: 23159799
extracellular: 24083427
extracellular: 25047395
extracellular: 28232208

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89901	Sorghum	extracellular	85.49	85.23
TraesCS7D01G369400.1	Wheat	extracellular	83.33	83.85
TraesCS7A01G353300.1	Wheat	extracellular	82.72	83.23
TraesCS7B01G274200.1	Wheat	extracellular	82.41	82.92
TraesCS7B01G274900.1	Wheat	extracellular	82.1	82.61
TraesCS7A01G353400.1	Wheat	extracellular	80.86	82.13
TraesCS7D01G369900.1	Wheat	extracellular	81.48	81.99
Os06t0546500-01	Rice	extracellular	70.06	71.38
VIT_12s0028g01830.t01	Wine grape	extracellular	59.88	71.06
Os06t0547100-00	Rice	extracellular	69.14	68.5
Solyc03g025380.2.1	Tomato	extracellular	65.74	66.56
KRH25796	Soybean	extracellular	64.81	65.83
PGSC0003DMT400040868	Potato	extracellular	64.81	65.83
KRH55722	Soybean	extracellular, vacuole	64.51	65.52
VIT_12s0028g01840.t01	Wine grape	extracellular	63.89	65.3
Os02t0236600-01	Rice	extracellular	63.27	63.86
KRH27066	Soybean	extracellular	60.8	62.54
Os01t0205900-01	Rice	extracellular	62.65	62.08
PGSC0003DMT400052649	Potato	cytosol	42.9	62.05
Solyc07g055190.2.1	Tomato	extracellular	60.8	61.76
Os02t0240100-01	Rice	extracellular	59.88	59.33
Os07t0676900-01	Rice	extracellular	58.02	59.12
Os02t0237000-00	Rice	extracellular	61.42	58.88
Os07t0677300-01	Rice	extracellular	56.79	58.6
Os02t0240300-01	Rice	extracellular	58.02	58.57
Os11t0112400-01	Rice	extracellular	58.33	58.33
Os07t0677200-01	Rice	extracellular	56.79	58.04
Os12t0112000-01	Rice	extracellular	58.02	57.49
Os11t0112200-01	Rice	extracellular	55.56	56.78
Os07t0677500-00	Rice	extracellular	54.32	56.59
Os12t0111800-00	Rice	extracellular	54.63	55.84
Os03t0434800-00	Rice	extracellular	57.41	55.52
Os04t0651000-01	Rice	extracellular	54.32	55.17
Os02t0236800-01	Rice	extracellular, plasma membrane	55.25	54.91
Os03t0339300-02	Rice	extracellular	53.7	54.38
Os07t0677600-01	Rice	extracellular	47.22	47.66
Os07t0677100-01	Rice	extracellular	42.9	44.13
Os07t0677400-00	Rice	extracellular	13.89	14.33

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	ProteinID:BAD54122.1	ProteinID:BAF19736.1
ProteinID:BAS98156.1	ProteinID:CAH69328.1	ProteinID:EEE65851.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	EMBL:KJ909973	EnsemblPlantsGene:Os06g0547400	EnsemblPlants:Os06t0547400-01	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31388	PANTHER:PTHR31388:SF18
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	UniProt:Q5Z7J2	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000446F54	SEG:seg	:	:

Description

class III peroxidase 86, peroxidase FLXPER4, PER4Similar to Peroxidase P7 (EC 1.11.1.7) (TP7). (Os06t0547400-01)

Coordinates

chr6:-:20705378..20706934

Molecular Weight (calculated)

34065.3 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.033

Length

324 amino acids

Sequence
(BLAST)

001: MAGVVITGRA LVAAVAVVVA VLLGGAAEAQ QLSPNFYSRT CPNLATIVRS GMASAVRTEP RMGASILRLF FHDCFVNGCD GSILLDDTST FTGEKSAGPN
101: ANSARGFEVI DAIKTQVEAS CKATVSCADI LALAARDGVN LLGGPTWSVA LGRKDSRTAS QSAANSNLPG PGSSLATLIS MFGNQGLSAR DMTALSGAHT
201: IGRAQCQFFR SRIYTERNIN ASFASLRQQT CPRSGGDANL APFDVQTPDA FDNAYYQNLV SQRGLLHSDQ ELFNGGSQDG LVRQYSTNPS QFSSDFVSAM
301: VKMGNLLPSS GTATEVRLNC RKVN

Best Arabidopsis Sequence Match ( AT5G05340.1 )
(BLAST)

001: MASNKLISIL VLVVTLLLQG DNNYVVEAQL TTNFYSTSCP NLLSTVQTAV KSAVNSEARM GASILRLFFH DCFVNGCDGS ILLDDTSSFT GEQNAAPNRN
101: SARGFNVIDN IKSAVEKACP GVVSCADILA IAARDSVVAL GGPNWNVKVG RRDARTASQA AANSNIPAPT SSLSQLISSF SAVGLSTRDM VALSGAHTIG
201: QSRCTNFRAR IYNETNINAA FATTRQRTCP RASGSGDGNL APLDVTTAAS FDNNYFKNLM TQRGLLHSDQ VLFNGGSTDS IVRGYSNNPS SFNSDFTAAM
301: IKMGDISPLT GSSGEIRKVC GRTN

Arabidopsis Description

PER52Peroxidase 52 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLC0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.