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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 endoplasmic reticulum: 27224218
mitochondrion: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH72790 Soybean endoplasmic reticulum 83.57 92.88
KRG98179 Soybean extracellular 71.03 78.46
KRH30138 Soybean extracellular 69.92 77.47
KRG98180 Soybean extracellular 67.41 75.16
KRH72789 Soybean extracellular, golgi 63.79 69.39
VIT_06s0004g07750.t01 Wine grape extracellular 57.94 66.88
KRH76088 Soybean extracellular 54.87 61.76
KRH65472 Soybean plastid 51.53 60.86
KRH53775 Soybean extracellular 53.48 60.0
TraesCS4A01G136600.1 Wheat extracellular 54.6 59.94
KRH65467 Soybean extracellular 53.48 59.81
KRH64171 Soybean extracellular 53.2 59.69
KRH65470 Soybean extracellular 52.92 59.56
KRH65474 Soybean extracellular 53.48 59.26
KRH65471 Soybean extracellular 52.65 59.25
TraesCS4D01G170600.1 Wheat extracellular 53.76 59.2
TraesCS4B01G168100.1 Wheat extracellular 52.65 58.7
KRH65475 Soybean extracellular 52.37 58.57
KRH65476 Soybean extracellular, vacuole 51.81 58.31
KRH76091 Soybean extracellular 51.53 57.99
HORVU7Hr1G116550.5 Barley extracellular 53.2 57.7
KRH14872 Soybean nucleus 52.37 57.67
GSMUA_Achr9P04770_001 Banana extracellular 45.68 56.94
Zm00001d047514_P001 Maize extracellular 52.37 56.8
KRH73217 Soybean nucleus 51.25 56.79
KRH27066 Soybean extracellular 49.03 55.87
KRH55722 Soybean extracellular, vacuole 48.75 54.86
KRH25796 Soybean extracellular 48.47 54.55
Os07t0677600-01 Rice extracellular 48.75 54.52
KRH00399 Soybean extracellular 47.91 54.43
KRG98178 Soybean nucleus 49.58 54.27
KRH14873 Soybean extracellular, nucleus 48.47 53.54
KRH30136 Soybean nucleus 49.03 53.5
EER99906 Sorghum extracellular 48.19 53.4
KRH72788 Soybean endoplasmic reticulum, vacuole 47.08 52.81
KRH00400 Soybean extracellular 47.08 52.48
KRH17142 Soybean extracellular, vacuole 46.52 52.35
TraesCS2D01G107300.1 Wheat extracellular 46.8 52.34
Zm00001d022453_P001 Maize extracellular 47.08 52.16
KRH40790 Soybean extracellular 46.52 51.86
KRH72792 Soybean nucleus 46.8 51.85
KRH40791 Soybean endoplasmic reticulum, extracellular, plastid 49.3 51.75
TraesCS2A01G106700.1 Wheat extracellular 46.24 51.71
TraesCS2B01G124300.1 Wheat extracellular 45.96 51.4
KRG98181 Soybean extracellular 45.68 51.25
KRH17144 Soybean extracellular 46.24 51.23
KRH30142 Soybean extracellular 45.4 50.94
KRH29155 Soybean extracellular 45.68 50.77
OQU92637 Sorghum extracellular 52.92 50.67
KRG91738 Soybean endoplasmic reticulum, extracellular, vacuole 45.13 50.15
KRG92979 Soybean extracellular 46.24 49.85
KRH65489 Soybean extracellular 45.4 49.39
KRH35030 Soybean extracellular 44.01 48.92
KRH65488 Soybean extracellular 39.83 43.87
Protein Annotations
KEGG:00940+1.11.1.7Gene3D:1.10.420.10Gene3D:1.10.520.10MapMan:35.1EMBL:ACUP02009056EnsemblPlantsGene:GLYMA_14G201700
GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0020037GO:GO:0042744GO:GO:0046872
GO:GO:0055114GO:GO:0098869InterPro:Haem_peroxidaseInterPro:Haem_peroxidase_pln/fun/bacUniProt:I1MBI9InterPro:IPR002016
EnsemblPlants:KRH17143ProteinID:KRH17143ProteinID:KRH17143.1PFAM:PF00141PRINTS:PR00458PRINTS:PR00461
ScanProsite:PS00435ScanProsite:PS00436PFscan:PS50873PANTHER:PTHR31388PANTHER:PTHR31388:SF36MetaCyc:PWY-5461
MetaCyc:PWY-5466MetaCyc:PWY-5469MetaCyc:PWY-6824MetaCyc:PWY-7214MetaCyc:PWY-7445InterPro:Peroxidase_pln
InterPro:Peroxidases_ASInterPro:Peroxidases_heam-ligand_BSSUPFAM:SSF48113InterPro:Secretory_peroxidaseTMHMM:TMhelixUniParc:UPI0001D842FD
Description
hypothetical protein
Coordinates
chr14:-:46711634..46715644
Molecular Weight (calculated)
40016.6 Da
IEP (calculated)
9.976
GRAVY (calculated)
-0.083
Length
359 amino acids
Sequence
(BLAST)
001: MRLDGLWVPC TFTLYKSFLL LAMFCNTQTY NKMASFHIQY SFLVLVLAMV ITLMNPTNAT LSPHFYDKVC PQALPVIKSV VQRAIIRERR IGASLLRLHF
101: HDCFVNGCDG SILLDDTRNF TGEKTALPNL NSVRGFSVVD EIKAAVDKAC KRHVVSCADI LAIAARDSIA IYGGPHYWYQ VLLGRRDART ASKAAANSNL
201: PPPTFSFSQL VSNFKSHGLN VRDLVALSGG HTIGFARCTT FRNRIYNVSN NIIDPTFAAS VRKTCPKSGG DNNLHPLDAT PTRVDTTYYT DLLHKKGLLH
301: SDQELFKGKG TESDKLVQLY SRIPLAFARD FKASMIKMGN MKPLTGRQGE IRCNCRRVN
Best Arabidopsis Sequence Match ( AT2G18150.1 )
(BLAST)
001: MARIGSFLII LYLIYALTLC ICDDDESNYG GDKGNLFPGF YRSSCPRAEE IVRSVVAKAV ARETRMAASL MRLHFHDCFV QGCDGSLLLD TSGSIVTEKN
101: SNPNSRSARG FEVVDEIKAA LENECPNTVS CADALTLAAR DSSVLTGGPS WMVPLGRRDS TSASLSGSNN NIPAPNNTFN TIVTRFNNQG LDLTDVVALS
201: GSHTIGFSRC TSFRQRLYNQ SGNGSPDRTL EQSYAANLRQ RCPRSGGDQN LSELDINSAG RFDNSYFKNL IENMGLLNSD EVLFSSNEQS RELVKKYAED
301: QEEFFEQFAE SMIKMGNISP LTGSSGEIRK NCRKINNS
Arabidopsis Description
PER15Peroxidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI16]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.