Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023983.1-P | Field mustard | nucleus | 99.13 | 99.13 |
| CDX72327 | Canola | nucleus | 77.1 | 93.33 |
| CDX75196 | Canola | nucleus | 62.61 | 76.33 |
| CDY39879 | Canola | nucleus | 67.25 | 75.57 |
| CDX68787 | Canola | nucleus | 68.7 | 74.29 |
| AT4G31800.1 | Thale cress | nucleus | 66.09 | 73.55 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 29.57 | 53.12 |
| CDX86714 | Canola | nucleus | 12.17 | 49.41 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 26.38 | 47.89 |
| PGSC0003DMT400019058 | Potato | nucleus | 35.94 | 47.51 |
| PGSC0003DMT400019061 | Potato | nucleus | 34.2 | 46.64 |
| Solyc08g067340.2.1 | Tomato | nucleus | 34.2 | 46.64 |
| Solyc08g067360.2.1 | Tomato | nucleus | 34.2 | 45.74 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 31.01 | 45.53 |
| KRH61669 | Soybean | nucleus | 28.99 | 45.45 |
| GSMUA_Achr10P... | Banana | nucleus | 30.43 | 45.26 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 41.16 | 44.8 |
| KRH15674 | Soybean | nucleus | 36.23 | 44.33 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 34.78 | 42.86 |
| GSMUA_Achr11P... | Banana | nucleus | 30.14 | 42.45 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 33.62 | 42.18 |
| CDY22299 | Canola | nucleus | 35.36 | 42.07 |
| CDX67971 | Canola | nucleus | 35.94 | 41.75 |
| CDY67287 | Canola | nucleus | 35.07 | 41.72 |
| CDX88573 | Canola | nucleus | 35.94 | 41.2 |
| CDX87347 | Canola | nucleus | 35.36 | 40.67 |
| CDX79347 | Canola | nucleus | 35.07 | 40.6 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 20.29 | 40.23 |
| GSMUA_Achr10P... | Banana | nucleus | 33.04 | 39.58 |
| KRH05350 | Soybean | nucleus | 35.36 | 39.1 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 24.93 | 38.56 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 30.72 | 36.68 |
| KRH52329 | Soybean | nucleus | 31.88 | 35.6 |
| Os02t0181300-01 | Rice | nucleus | 34.78 | 34.48 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 33.04 | 34.03 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 34.2 | 33.71 |
| Zm00001d053746_P001 | Maize | nucleus | 31.3 | 33.64 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 33.91 | 33.62 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 31.59 | 33.44 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 31.3 | 33.33 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 31.59 | 33.33 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 31.88 | 33.23 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 31.59 | 33.23 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 31.01 | 33.23 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 30.72 | 33.23 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 31.59 | 33.13 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 31.3 | 33.13 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 31.59 | 32.93 |
| Zm00001d020492_P001 | Maize | nucleus | 28.7 | 32.78 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 33.33 | 32.58 |
| Zm00001d015515_P001 | Maize | nucleus | 32.75 | 32.56 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 30.72 | 32.42 |
| Os06t0649000-01 | Rice | nucleus | 31.59 | 32.34 |
| EES04642 | Sorghum | nucleus | 33.91 | 32.14 |
| Os09t0417600-02 | Rice | nucleus | 30.43 | 32.11 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 25.22 | 32.1 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 30.72 | 32.02 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 32.75 | 31.83 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 24.93 | 31.73 |
| EER98905 | Sorghum | nucleus, plastid | 29.86 | 31.5 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 26.38 | 31.49 |
| Zm00001d046805_P001 | Maize | nucleus | 31.88 | 31.34 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 31.59 | 31.32 |
| EER90124 | Sorghum | nucleus | 31.01 | 31.29 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 29.86 | 31.21 |
| EER88729 | Sorghum | nucleus | 31.01 | 30.75 |
| Zm00001d036726_P001 | Maize | nucleus | 30.43 | 30.52 |
| Zm00001d020495_P001 | Maize | nucleus | 23.48 | 30.45 |
| KXG35639 | Sorghum | nucleus | 25.8 | 30.17 |
| TraesCS7D01G497300.1 | Wheat | plastid | 31.88 | 29.57 |
| Os09t0417800-01 | Rice | nucleus | 26.38 | 28.62 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 30.72 | 28.57 |
| Zm00001d005749_P001 | Maize | nucleus | 27.54 | 27.07 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 31.59 | 26.85 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 30.14 | 26.6 |
| CDX97845 | Canola | nucleus | 15.36 | 21.99 |
| CDY26717 | Canola | nucleus | 16.81 | 20.21 |
| CDX81493 | Canola | nucleus | 16.81 | 18.71 |
| CDX96044 | Canola | nucleus | 17.1 | 17.99 |
| CDY01891 | Canola | nucleus | 17.1 | 17.99 |
| CDY16669 | Canola | nucleus | 25.22 | 17.68 |
| CDX94553 | Canola | nucleus | 24.93 | 17.52 |
| CDY11652 | Canola | nucleus | 19.42 | 17.49 |
| CDY12937 | Canola | nucleus | 27.83 | 17.39 |
| CDY19535 | Canola | nucleus | 27.83 | 17.39 |
| CDY22006 | Canola | nucleus | 24.35 | 17.14 |
| CDX85563 | Canola | nucleus | 15.07 | 16.77 |
| CDY07121 | Canola | nucleus | 24.06 | 16.77 |
| CDY68857 | Canola | nucleus | 17.97 | 16.76 |
| CDY56082 | Canola | nucleus | 18.55 | 16.71 |
| CDX69548 | Canola | nucleus | 20.87 | 16.67 |
| CDY63770 | Canola | nucleus | 24.35 | 16.34 |
| CDX82900 | Canola | nucleus | 24.64 | 16.31 |
| CDX90863 | Canola | nucleus | 23.77 | 16.17 |
| CDY21301 | Canola | nucleus | 23.77 | 16.17 |
| CDX70593 | Canola | nucleus | 24.64 | 16.16 |
| CDX78611 | Canola | nucleus | 24.35 | 15.94 |
| CDY24892 | Canola | nucleus | 23.77 | 15.65 |
| CDX69549 | Canola | nucleus | 24.93 | 15.61 |
| CDX85052 | Canola | nucleus | 24.64 | 15.45 |
| CDY08634 | Canola | nucleus | 22.32 | 15.31 |
| CDY28692 | Canola | nucleus | 23.48 | 15.06 |
| CDX81900 | Canola | nucleus | 22.61 | 15.03 |
| CDY21693 | Canola | nucleus | 22.61 | 15.03 |
| CDX96692 | Canola | nucleus | 22.32 | 14.89 |
| CDX83804 | Canola | nucleus | 22.03 | 14.76 |
| CDY19255 | Canola | nucleus | 8.7 | 12.61 |
| CDX86713 | Canola | nucleus | 2.61 | 7.63 |
| CDY72612 | Canola | nucleus | 4.06 | 5.81 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JX60 | UniProt:A0A078JX60 | EnsemblPlants:CDY70096 | ProteinID:CDY70096 |
| ProteinID:CDY70096.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00096312001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF32 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDEEF0 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaAnng32610DBnaAnng32610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX60]
Coordinates
chrLK041146:-:377..3005
Molecular Weight (calculated)
38502.9 Da
IEP (calculated)
4.454
GRAVY (calculated)
-0.898
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSSFLDLN TNPFDHNFPA KLPKEEVKVS TSSDLERKQN ASELREELNR VNSENKKLTE MLAAVWENYY ALHHHLEKLQ SRKSPEMDQI EQPTKRRKQD
101: SYELLGFGNG LSGGKTENSS SNEDHHQLLS CKRPVTDSFN KANVSTVYVP SDSSDTSLTV KDGYQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR
201: SAEDPSILVA TYEGTHNHLG PNGSEGDVTS QVGSSTVTLD LVHSGQGTMQ EVLVRQMASS LTKDSKFTAA LAAAISGSGE EPPLKEEQIN EVEEPEQEID
301: DILLIDPHNH EYEDLTDDAT DEAVEDEFNK NDDVSSDDEN VDVSD
101: SYELLGFGNG LSGGKTENSS SNEDHHQLLS CKRPVTDSFN KANVSTVYVP SDSSDTSLTV KDGYQWRKYG QKVTRDNPSP RAYFRCSFAP SCPVKKKVQR
201: SAEDPSILVA TYEGTHNHLG PNGSEGDVTS QVGSSTVTLD LVHSGQGTMQ EVLVRQMASS LTKDSKFTAA LAAAISGSGE EPPLKEEQIN EVEEPEQEID
301: DILLIDPHNH EYEDLTDDAT DEAVEDEFNK NDDVSSDDEN VDVSD
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.