Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90124 | Sorghum | nucleus | 70.66 | 72.51 |
| EER88729 | Sorghum | nucleus | 70.09 | 70.69 |
| Zm00001d036726_P001 | Maize | nucleus | 67.81 | 69.19 |
| Os06t0649000-01 | Rice | nucleus | 65.24 | 67.95 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 58.97 | 62.92 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 57.55 | 61.96 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 57.55 | 61.77 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 56.98 | 61.16 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 54.99 | 60.5 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 56.13 | 60.43 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 54.7 | 59.26 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 55.27 | 59.15 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 54.13 | 59.01 |
| Zm00001d053746_P001 | Maize | nucleus | 51.85 | 56.7 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 46.44 | 56.4 |
| Zm00001d015515_P001 | Maize | nucleus | 55.56 | 56.2 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 55.56 | 56.03 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 60.4 | 52.22 |
| TraesCS7D01G497300.1 | Wheat | plastid | 54.13 | 51.08 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 38.18 | 47.86 |
| Bra019123.1-P | Field mustard | nucleus | 24.5 | 44.33 |
| PGSC0003DMT400073710 | Potato | nucleus | 27.35 | 44.24 |
| Solyc12g042590.1.1 | Tomato | nucleus | 27.07 | 43.98 |
| KRH61669 | Soybean | nucleus | 26.21 | 41.82 |
| KRH23643 | Soybean | nucleus | 36.47 | 41.42 |
| KRH47344 | Soybean | nucleus | 36.47 | 41.16 |
| KRH44560 | Soybean | nucleus | 36.18 | 40.58 |
| Bra035148.1-P | Field mustard | nucleus | 34.19 | 40.0 |
| CDX87347 | Canola | nucleus | 34.19 | 40.0 |
| Solyc08g067340.2.1 | Tomato | nucleus | 28.77 | 39.92 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 35.33 | 39.87 |
| CDX88573 | Canola | nucleus | 34.19 | 39.87 |
| CDY67287 | Canola | nucleus | 32.76 | 39.66 |
| CDX67971 | Canola | nucleus | 33.33 | 39.39 |
| Bra003588.1-P | Field mustard | nucleus | 33.33 | 39.39 |
| Bra008435.1-P | Field mustard | nucleus | 32.48 | 39.31 |
| CDY22299 | Canola | nucleus | 32.48 | 39.31 |
| CDX75196 | Canola | nucleus | 31.62 | 39.22 |
| PGSC0003DMT400019061 | Potato | nucleus | 28.21 | 39.13 |
| PGSC0003DMT400019058 | Potato | nucleus | 29.06 | 39.08 |
| KRH15674 | Soybean | nucleus | 31.34 | 39.01 |
| CDX72327 | Canola | nucleus | 31.62 | 38.95 |
| CDX79347 | Canola | nucleus | 33.05 | 38.93 |
| AT1G80840.1 | Thale cress | nucleus | 33.33 | 38.74 |
| Solyc08g067360.2.1 | Tomato | nucleus | 28.21 | 38.37 |
| KRH09652 | Soybean | nucleus | 35.9 | 38.18 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 34.19 | 37.85 |
| Bra010220.1-P | Field mustard | nucleus | 32.48 | 37.01 |
| AT2G25000.1 | Thale cress | nucleus | 28.49 | 36.9 |
| CDY39879 | Canola | nucleus | 32.19 | 36.81 |
| Zm00001d020492_P001 | Maize | nucleus | 31.62 | 36.76 |
| CDX68787 | Canola | nucleus | 33.05 | 36.36 |
| Bra011299.1-P | Field mustard | nucleus | 32.76 | 36.28 |
| AT4G31800.1 | Thale cress | nucleus | 31.91 | 36.13 |
| KRH05350 | Soybean | nucleus | 31.62 | 35.58 |
| Zm00001d020495_P001 | Maize | nucleus | 26.78 | 35.34 |
| Solyc03g116890.2.1 | Tomato | nucleus | 34.76 | 34.86 |
| PGSC0003DMT400051047 | Potato | nucleus | 33.9 | 33.52 |
| Solyc06g068460.2.1 | Tomato | nucleus | 34.19 | 33.33 |
| PGSC0003DMT400073396 | Potato | nucleus | 34.19 | 33.33 |
| KRH52329 | Soybean | nucleus | 28.49 | 32.36 |
| Bra023983.1-P | Field mustard | nucleus | 31.34 | 31.88 |
| CDY70096 | Canola | nucleus | 31.34 | 31.88 |
| Zm00001d005749_P001 | Maize | nucleus | 31.05 | 31.05 |
| Zm00001d045375_P001 | Maize | nucleus | 13.96 | 19.6 |
| Zm00001d011237_P001 | Maize | nucleus | 15.95 | 18.79 |
| Zm00001d008190_P001 | Maize | nucleus | 23.08 | 15.98 |
| Zm00001d008794_P001 | Maize | nucleus | 23.93 | 15.56 |
| Zm00001d039532_P001 | Maize | nucleus | 23.93 | 15.36 |
| Zm00001d024768_P001 | Maize | nucleus | 23.08 | 14.81 |
| Zm00001d040554_P001 | Maize | nucleus | 24.22 | 14.63 |
| Zm00001d039245_P001 | Maize | nucleus | 22.51 | 14.6 |
| Zm00001d009595_P001 | Maize | nucleus | 23.65 | 13.61 |
| Zm00001d018203_P001 | Maize | nucleus | 21.94 | 13.3 |
| Zm00001d039044_P001 | Maize | nucleus | 22.79 | 12.74 |
Protein Annotations
| EntrezGene:103638821 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ProteinID:AQL05036.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:K7VBH9 | EMBL:KJ728369 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF33 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000221A213 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d046805 |
| EnsemblPlants:Zm00001d046805_P001 | EnsemblPlants:Zm00001d046805_T001 | SEG:seg | : | : | : |
Description
WRKY-transcription factor 124Putative WRKY DNA-binding domain superfamily protein
Coordinates
chr9:-:106603130..106604806
Molecular Weight (calculated)
37961.6 Da
IEP (calculated)
9.983
GRAVY (calculated)
-0.680
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSRARASS GTAAAAMDPW IAQPSLSLDL KVGLPTPAKV VLVEETNNFL AVSRTKDREV EALEAELRRV GDENKRLSEM LRALLANYTE LQGQVNDMVV
101: VAAAANRQSS TSEGGSAASP SRKRIRSDSL DTAPHHQQNT RKPSPSPPFA AHDQMECTSA AATAAAAFHH EPGSRVREEC KSKVSRRYVH ADPSDLSLAV
201: KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP SCPVKKKVQR SADDRTILVA TYEGDHNHAQ PPRHNGGGSK AATRSTPAAT EAARPAPPPL PLQHQHQHQQ
301: KQEAATGPSS EVARKNLAEH MAVTLTRDPG FKAALVSALS GRILDLSPPR D
101: VAAAANRQSS TSEGGSAASP SRKRIRSDSL DTAPHHQQNT RKPSPSPPFA AHDQMECTSA AATAAAAFHH EPGSRVREEC KSKVSRRYVH ADPSDLSLAV
201: KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP SCPVKKKVQR SADDRTILVA TYEGDHNHAQ PPRHNGGGSK AATRSTPAAT EAARPAPPPL PLQHQHQHQQ
301: KQEAATGPSS EVARKNLAEH MAVTLTRDPG FKAALVSALS GRILDLSPPR D
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.