Factsheet for Zm00001d040554_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00609	Sorghum	nucleus	82.1	81.96
Zm00001d008190_P001	Maize	nucleus	60.76	69.63
Os01t0289600-00	Rice	nucleus, plastid	38.73	54.74
Zm00001d024768_P001	Maize	nucleus	44.58	47.35
GSMUA_Achr2P18390_001	Banana	nucleus	28.4	44.96
VIT_07s0005g02570.t01	Wine grape	nucleus	38.73	44.47
KRG96611	Soybean	nucleus	37.01	41.67
KRH68345	Soybean	endoplasmic reticulum, vacuole	37.69	40.48
KRH69145	Soybean	nucleus	33.39	40.08
GSMUA_Achr11P...	Banana	nucleus	28.74	39.86
KRH33656	Soybean	nucleus	33.05	39.75
Zm00001d039245_P001	Maize	nucleus	29.09	31.24
Zm00001d011237_P001	Maize	nucleus	15.32	29.87
Zm00001d020492_P001	Maize	nucleus	15.15	29.14
Zm00001d020495_P001	Maize	nucleus	12.91	28.2
Zm00001d008794_P001	Maize	nucleus	25.13	27.04
Zm00001d053746_P001	Maize	nucleus	14.63	26.48
Zm00001d009595_P001	Maize	nucleus	27.54	26.23
Zm00001d039532_P001	Maize	nucleus	23.92	25.41
Zm00001d015515_P001	Maize	nucleus	14.97	25.07
Zm00001d039044_P001	Maize	nucleus	26.51	24.52
Zm00001d046805_P001	Maize	nucleus	14.63	24.22
Zm00001d045375_P001	Maize	nucleus	10.15	23.6
Zm00001d036726_P001	Maize	nucleus	13.94	23.55
Zm00001d005749_P001	Maize	nucleus	13.94	23.08
Zm00001d018203_P001	Maize	nucleus	20.14	20.21

Protein Annotations

EntrezGene:103650062	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6MRA7	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
ProteinID:ONM31528.1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000221139F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d040554	EnsemblPlants:Zm00001d040554_P001
EnsemblPlants:Zm00001d040554_T001	SEG:seg	:	:	:	:

Description

WRKY-transcription factor 99Probable WRKY transcription factor 47

Coordinates

chr3:+:49328805..49332591

Molecular Weight (calculated)

60615.2 Da

IEP (calculated)

8.137

GRAVY (calculated)

-0.400

Length

581 amino acids

Sequence
(BLAST)

001: METKPEPHRQ NHVRHEEAQE GEQAAVMEHG ALSLQRGVTN LFGRRHDEKQ AVGRRGEIRE VDFFSRVSRP RDQDSGGGGG RGVSGGGRDD VYIELDLLTT
101: TTAATTCAGD EVMQTKNQKI EASAVEAELR RVVEENRRLR GILEELTRSY GALYQQLLLV TQGQHHQHRL HPADLMISRP SLAHTHLTST AASQYSASTR
201: LLLEARASSS AVAQPRAVED EVVSGAGDGA GVVEASPSLS NGGNNDNDAA AADGKRKTSP PRESGEQAAA SSELPGRKAR VSVRARSEAP MISDGCQWRK
301: YGQKMAKGNP CPRAYYRCTM AVACPVRKQV QRCAEDKTIL VTTYEGHHNH PLPPAATTMA NTTSAAAAML LSGPATSRDG AAALLGHPAA ALFHHSSSSI
401: PYASTMATLS ASAPFPTITL DLTQQAPGGL LPHGLHRPPG GMHPVVAAPA AAMPFPAPSP LAMFLPQRAP TVPTGLPVAP RQQQQQQSVM ETVTAAIAAD
501: PNFTTALAAA ISSVMAGAAH QAQQPTPRAS NIIGIPGDEA NGGSAGAATA GPSPTTTAAG AHAASGGSPR FATQSCTTST T

Best Arabidopsis Sequence Match ( AT4G04450.1 )
(BLAST)

001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ

Arabidopsis Description

WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.