CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69145	Soybean	nucleus	86.54	86.36
KRG96611	Soybean	nucleus	55.69	52.13
KRH68345	Soybean	endoplasmic reticulum, vacuole	55.9	49.91
VIT_07s0005g02570.t01	Wine grape	nucleus	49.28	47.04
KRG89544	Soybean	nucleus	14.91	44.17
GSMUA_Achr2P18390_001	Banana	nucleus	29.4	38.69
Os05t0137500-00	Rice	nucleus	36.44	37.13
KRH02502	Soybean	nucleus	29.19	36.06
KRH19450	Soybean	nucleus	28.16	35.51
GSMUA_Achr11P...	Banana	nucleus	30.64	35.32
KRH02033	Soybean	nucleus	34.37	33.95
KRH51128	Soybean	nucleus, plastid	36.23	33.85
Os01t0289600-00	Rice	nucleus, plastid	28.16	33.09
Zm00001d040554_P001	Maize	nucleus	39.75	33.05
EES00609	Sorghum	nucleus	39.13	32.47
KRH36485	Soybean	nucleus	36.23	32.35
Zm00001d008190_P001	Maize	nucleus	33.13	31.56
Zm00001d024768_P001	Maize	nucleus	35.61	31.44
KRH73787	Soybean	nucleus	26.71	30.71
KRH11472	Soybean	nucleus	35.2	30.52
KRH47344	Soybean	nucleus	19.46	30.23
KRH42243	Soybean	nucleus	11.18	29.83
KRH23643	Soybean	nucleus	19.05	29.77
KRG98705	Soybean	nucleus	29.4	29.71
KRH15674	Soybean	nucleus	17.18	29.43
KRH12664	Soybean	nucleus	27.33	29.27
KRH46231	Soybean	nucleus	29.4	29.22
KRH38314	Soybean	nucleus	14.29	28.51
KRH44560	Soybean	nucleus	18.43	28.43
KRH37650	Soybean	nucleus	26.71	28.17
KRG93506	Soybean	nucleus	28.36	27.96
KRH25355	Soybean	nucleus	35.4	27.85
KRH22585	Soybean	nucleus	35.4	27.85
KRH61669	Soybean	nucleus	12.22	26.82
KRH56160	Soybean	nucleus	34.78	26.75
KRH09652	Soybean	nucleus	18.22	26.67
KRH05350	Soybean	nucleus	16.98	26.28
KXG21247	Sorghum	nucleus	30.64	26.1
KRH61668	Soybean	nucleus	12.01	24.68
KRH63398	Soybean	nucleus	27.12	24.67
KRH56941	Soybean	nucleus	28.36	24.51
KRH01137	Soybean	nucleus	27.33	24.4
KRH33270	Soybean	nucleus	15.32	24.26
KRH58361	Soybean	nucleus	24.02	23.92
KRH40121	Soybean	nucleus	26.71	23.84
KRH03442	Soybean	nucleus	29.19	23.5
KRH54509	Soybean	nucleus	29.61	23.25
KRH74791	Soybean	nucleus	24.43	23.18
KRH15655	Soybean	nucleus	13.25	23.02
KRH69334	Soybean	nucleus	25.05	22.96
KRG99150	Soybean	nucleus	24.84	22.68
KRH05362	Soybean	nucleus	13.04	22.66
KRH54838	Soybean	cytosol, nucleus	10.77	22.13
KRH52329	Soybean	nucleus	13.46	21.04

Protein Annotations

EntrezGene:100780044	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0R0I187	EMBL:ACUP02006548	EnsemblPlantsGene:GLYMA_10G138300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRH33656	ProteinID:KRH33656	ProteinID:KRH33656.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31429	PANTHER:PTHR31429:SF30	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0006ED8B5E	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:37190811..37195268

Molecular Weight (calculated)

52901.3 Da

IEP (calculated)

6.876

GRAVY (calculated)

-0.566

Length

483 amino acids

Sequence
(BLAST)

001: MENHHQMQQP NREFTILRST DFLRQNLNLY PTTVNTGEHA DPSIKEVDFF SSRSPTKNSD TDNSSPEEPH DHRHTNMAKD DGSPTLFNDQ LVNTALNLSP
101: SAGLSRSAAN DENIETLLTT LQRESLRLKE ENCKLRTMLD QITKNYNQLQ LFIALQKQKQ CQKMETNLNG MMFGQHLLDP RGPFTKLDAQ VAPFPDDKSG
201: QRQGHPETDP VEDVLEQSTS QSWGSSKSPK FEESNSSELP LKKTRVSVRA RSEAPLISDG CQWRKYGQKI AKGNPCPRAY YRCTMAVGCP VRKQVQRCMD
301: DKTVLITTYE GNHNHPLPPS AIVMANSTSA AASMFLSSSC STSNNNEALS NTVGVFSSMP YIPMATLSTS APFPTITLDM TTNPSALTSP LPLHATTFPQ
401: LLGHPVIFPH KMPHPLLGQQ QPLFTTETMS AAIASNPNFT IALAAAISSI IGAPRGNDGI NNNSSNGGSD LPLNGTSMLP GST

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.