CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98705	Soybean	nucleus	78.81	80.13
KRH73787	Soybean	nucleus	48.97	56.67
KRG89544	Soybean	nucleus	14.61	43.56
VIT_19s0090g00840.t01	Wine grape	nucleus	44.44	39.2
KRH02502	Soybean	nucleus	29.22	36.32
KRH19450	Soybean	nucleus	28.6	36.29
KRH02033	Soybean	nucleus	34.77	34.56
KRH36485	Soybean	nucleus	37.24	33.46
KRH51128	Soybean	nucleus, plastid	34.98	32.88
KRH11472	Soybean	nucleus	36.63	31.96
KRH12664	Soybean	nucleus	29.22	31.49
KRH61669	Soybean	nucleus	14.2	31.36
TraesCSU01G001200.1	Wheat	nucleus	37.45	31.27
KRH47344	Soybean	nucleus	19.96	31.19
TraesCS1D01G412500.1	Wheat	nucleus	37.45	30.8
KRH37650	Soybean	nucleus	29.01	30.79
KRH22585	Soybean	nucleus	38.89	30.78
KRG96611	Soybean	nucleus	32.3	30.43
KRH23643	Soybean	nucleus	19.34	30.42
KRH38314	Soybean	nucleus	15.02	30.17
KRH25355	Soybean	nucleus	37.86	29.97
KRH44560	Soybean	nucleus	19.14	29.71
KRH33656	Soybean	nucleus	29.22	29.4
TraesCS1B01G434300.1	Wheat	nucleus	37.65	29.23
KRH69145	Soybean	nucleus	28.6	28.72
KXG22547	Sorghum	nucleus	37.04	28.53
KRH15674	Soybean	nucleus	16.46	28.37
KRG93506	Soybean	nucleus	28.6	28.37
KRH56160	Soybean	nucleus	36.63	28.34
KRH68345	Soybean	endoplasmic reticulum, vacuole	31.48	28.28
KRH09652	Soybean	nucleus	19.14	28.18
Zm00001d009595_P001	Maize	nucleus	35.19	28.03
KRH42243	Soybean	nucleus	10.29	27.62
KRH05350	Soybean	nucleus	17.28	26.92
Zm00001d039044_P001	Maize	nucleus	33.74	26.11
KRH63398	Soybean	nucleus	28.4	25.99
Os05t0567200-00	Rice	nucleus	31.28	25.89
KRH33270	Soybean	nucleus	16.05	25.57
KRH52329	Soybean	nucleus	15.84	24.92
KRH56941	Soybean	nucleus	28.4	24.69
KRH61668	Soybean	nucleus	11.93	24.68
KRH15655	Soybean	nucleus	13.79	24.1
KRH03442	Soybean	nucleus	29.63	24.0
KRH74791	Soybean	nucleus	24.9	23.77
KRH54509	Soybean	nucleus	30.04	23.74
KRG99150	Soybean	nucleus	25.51	23.44
KRH05362	Soybean	nucleus	12.76	22.3
KRH54838	Soybean	cytosol, nucleus	10.7	22.13
KRH58361	Soybean	nucleus	21.81	21.86
KRH69334	Soybean	nucleus	23.66	21.82
KRH01137	Soybean	nucleus	24.07	21.63
KRH40121	Soybean	nucleus	23.66	21.26

Protein Annotations

EntrezGene:100804246	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02005329	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G320200
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:K7LA71	EnsemblPlants:KRH46231	ProteinID:KRH46231	ProteinID:KRH46231.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002960B55
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:43917973..43923224

Molecular Weight (calculated)

53408.8 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.587

Length

486 amino acids

Sequence
(BLAST)

001: MYKKLTSKME ATCNDISNVA VTQSSPTMSF NGKRLVVDEI DFFAEKKKKK KSEVDDQMVH HQMELPNTSL DLLITNSTST SNRSNMEEEL SEAKDNTRNK
101: FVAMLSELQE MNAENQRLRE LVHNLNNKYN ALHKDLMKLT HKQHENEING AIKENDKRDD MIIPRSLLDI GIATKEDPSQ QHYSERKLQE SKNIIDKLDS
201: GKDSEKSMVD QHESPADHKA LWGWISTEAT RLSSLRDVDQ ASETMSMIKK ARVSVRARTD SSMISDGCQW RKYGQKMAKG NPCPRSYYRC SMGTACPVRK
301: QVQRSAEDQS VLITTYEGQH NHVLPPTAKA MASTTSAVTS MLLSGSMLSS DGLIHPNILE STAALSCSQN TAATLSASAP FPTITLDLTQ SATNNSSQLL
401: QGAPQDNQHS LLSPVLAQKF MSSATNIFDQ GTETASFVDT VNAATAAITA DPKFSAALMA AITSIIGGSH SNINGTSGDI QHGNNN

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.