Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009595_P001 | Maize | nucleus | 73.38 | 75.9 |
| Zm00001d039044_P001 | Maize | nucleus | 67.83 | 68.15 |
| TraesCSU01G001200.1 | Wheat | nucleus | 53.72 | 58.25 |
| TraesCS1D01G412500.1 | Wheat | nucleus | 54.2 | 57.87 |
| Os05t0567200-00 | Rice | nucleus | 51.98 | 55.88 |
| TraesCS1B01G434300.1 | Wheat | nucleus | 53.25 | 53.67 |
| VIT_19s0090g00840.t01 | Wine grape | nucleus | 34.23 | 39.2 |
| KRG98705 | Soybean | nucleus | 28.21 | 37.24 |
| KRH73787 | Soybean | nucleus | 24.72 | 37.14 |
| KRH46231 | Soybean | nucleus | 28.53 | 37.04 |
| EES02155 | Sorghum | nucleus | 29.48 | 32.63 |
| EES03177 | Sorghum | nucleus | 15.37 | 29.22 |
| EES00609 | Sorghum | nucleus | 25.67 | 27.84 |
| KXG21247 | Sorghum | nucleus | 23.45 | 26.1 |
| KXG35639 | Sorghum | nucleus | 12.04 | 25.76 |
| EES02331 | Sorghum | nucleus | 22.19 | 25.55 |
| EER98905 | Sorghum | nucleus, plastid | 13.0 | 25.08 |
| EER90124 | Sorghum | nucleus | 12.84 | 23.68 |
| OQU75809 | Sorghum | nucleus | 23.45 | 23.68 |
| EER88729 | Sorghum | nucleus | 12.84 | 23.28 |
| EES05866 | Sorghum | nucleus | 20.44 | 22.32 |
| EES04642 | Sorghum | nucleus | 12.68 | 21.98 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1B6PA50 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:KXG22547 |
| ProteinID:KXG22547 | ProteinID:KXG22547.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF35 |
| SMART:SM00774 | EnsemblPlantsGene:SORBI_3009G234900 | SUPFAM:SSF118290 | UniParc:UPI00081AE603 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:57418453..57422639
Molecular Weight (calculated)
65852.1 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.481
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSYLGKRR LNGGADRETT TARAPAASSF LPAAAMGYEY GDAAEAADHH HLPRRVAAGE MDFFKKERKD AAAAAALAAF VPSSSDEHGI KEDDLTINMG
101: LHHVSGRKSS IRSEESSVDD GVSSNGVDHR ETKAELALAK SELGRLNEEN KQLKDMLSRM TIKFNAFQVQ MPVYTTLMQQ QQQRTNNHQA LLRGAPGHEL
201: MNVDPETKDH QEGSGGSHLL PRQFISSLGT APDDPLRSVG SDAMHGGGNS SGSSTSNAEP PPPQPLDYCP GNGLMVSSKE MMPLPAFEHG HQQPQQHLAH
301: EMGSSSRADE PPQPHHLAAA QQGWLSNKVH KFLPSKGPEP VPEAATMRKA RVSVRARSEA PMINDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ
401: VQRCAEDRTV VITTYEGHHN HPLPPAAMPM ASTTAAAASM LLSGSMPSAD GGSLMAGSNF LARAVLPCSS NVATISASAP FPTVTLDLTQ PPPGAASASA
501: SAFAQPPASA PAQARATGTE PSQLQAALAD AAGRPMPLTT QLFGQKLYDP SSKAPAAQAD AAGDTVSAAA VIASDPNFTA MLAAAIKSYI GSSGSGSNGA
601: GGSSGTTVLP PAGASSAGDS SRDDKVGEQG S
101: LHHVSGRKSS IRSEESSVDD GVSSNGVDHR ETKAELALAK SELGRLNEEN KQLKDMLSRM TIKFNAFQVQ MPVYTTLMQQ QQQRTNNHQA LLRGAPGHEL
201: MNVDPETKDH QEGSGGSHLL PRQFISSLGT APDDPLRSVG SDAMHGGGNS SGSSTSNAEP PPPQPLDYCP GNGLMVSSKE MMPLPAFEHG HQQPQQHLAH
301: EMGSSSRADE PPQPHHLAAA QQGWLSNKVH KFLPSKGPEP VPEAATMRKA RVSVRARSEA PMINDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ
401: VQRCAEDRTV VITTYEGHHN HPLPPAAMPM ASTTAAAASM LLSGSMPSAD GGSLMAGSNF LARAVLPCSS NVATISASAP FPTVTLDLTQ PPPGAASASA
501: SAFAQPPASA PAQARATGTE PSQLQAALAD AAGRPMPLTT QLFGQKLYDP SSKAPAAQAD AAGDTVSAAA VIASDPNFTA MLAAAIKSYI GSSGSGSNGA
601: GGSSGTTVLP PAGASSAGDS SRDDKVGEQG S
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.