Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G001200.1 | Wheat | nucleus | 60.82 | 61.34 |
| TraesCS1D01G412500.1 | Wheat | nucleus | 60.99 | 60.58 |
| TraesCS1B01G434300.1 | Wheat | nucleus | 59.8 | 56.07 |
| KXG22547 | Sorghum | nucleus | 55.88 | 51.98 |
| Zm00001d009595_P001 | Maize | nucleus | 52.13 | 50.16 |
| Zm00001d039044_P001 | Maize | nucleus | 50.43 | 47.13 |
| VIT_19s0090g00840.t01 | Wine grape | nucleus | 32.37 | 34.48 |
| KRG98705 | Soybean | nucleus | 25.89 | 31.8 |
| KRH46231 | Soybean | nucleus | 25.89 | 31.28 |
| KRH73787 | Soybean | nucleus | 21.98 | 30.71 |
| Os05t0137500-00 | Rice | nucleus | 21.12 | 26.16 |
| Os01t0586800-00 | Rice | nucleus | 7.84 | 23.71 |
| Os01t0289600-00 | Rice | nucleus, plastid | 16.18 | 23.11 |
| Os01t0185900-01 | Rice | nucleus | 18.57 | 21.5 |
| Os06t0146250-00 | Rice | nucleus | 20.78 | 20.2 |
| Os09t0417600-02 | Rice | nucleus | 11.07 | 19.88 |
| Os06t0649000-01 | Rice | nucleus | 11.24 | 19.58 |
| Os01t0246700-01 | Rice | nucleus | 13.46 | 19.13 |
| Os09t0417800-01 | Rice | nucleus | 9.71 | 17.92 |
| Os02t0181300-01 | Rice | nucleus | 10.56 | 17.82 |
| Os02t0770500-00 | Rice | nucleus | 17.38 | 15.72 |
Protein Annotations
| Gene3D:2.20.25.80 | MapMan:35.1 | UniProt:A0A0P0WQ06 | ProteinID:BAS95384.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| EnsemblPlantsGene:Os05g0567200 | EnsemblPlants:Os05t0567200-00 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF35 | UniParc:UPI000393C3BE |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
WRKY GENE 43Similar to WRKY transcription factor 43. (Os05t0567200-00)
Coordinates
chr5:+:28238562..28241041
Molecular Weight (calculated)
61026.8 Da
IEP (calculated)
6.466
GRAVY (calculated)
-0.417
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYVGVKGK NVVGGGDVGR EMPVAPPSSS SAAVGMVEFP AAAAGLGYAG MTAKEAGGGY QERRVVVGEM DFFKTAEKRG ERKEPPPATA TAAASGHAGA
101: SPDDLSLNKD DLTINMGLLV GRRRNSGSEE SIVDDGGVSS NDEEHREAKA ALAVTKAEIG RLSEENKRLK NMLSNVTTKY NSLQMQFVTL MQQRRSVLAA
201: PIHQQELLDP EKKEQEGSQQ QQQQLIPRQF ISLGSASLQP DVEAPHSVVV VGGDVCAPSS SNPDAAVPAM MPLPHFDHHN HHHPIHGGRE RGSSPAEADH
301: HRHHQQEQPP PPPQQQQQLP PSWLPADKVP RFLPGKGPEP VPEAATMRKA RVSVRARSDA PMVQRCAEDR TVLITTYEGN HNHPLPPAAM AMASTTAAAA
401: SMLLSGSMPS ADGSLMAGSN FLARAVLPCS STVATISASA PFPTVTLDLT QTAPPPPPAS STQPQPPRPE PAQLQAALAE AARPVALPQL FGQKLYDQSK
501: LSAVQAVAGT KGSDGGALAD TVNAATAAIA SDPNFTAVLA AALTSYIGSR SGSGGAGAGG SSGTVQPLMS GGGDSCSRDD KIGEQNS
101: SPDDLSLNKD DLTINMGLLV GRRRNSGSEE SIVDDGGVSS NDEEHREAKA ALAVTKAEIG RLSEENKRLK NMLSNVTTKY NSLQMQFVTL MQQRRSVLAA
201: PIHQQELLDP EKKEQEGSQQ QQQQLIPRQF ISLGSASLQP DVEAPHSVVV VGGDVCAPSS SNPDAAVPAM MPLPHFDHHN HHHPIHGGRE RGSSPAEADH
301: HRHHQQEQPP PPPQQQQQLP PSWLPADKVP RFLPGKGPEP VPEAATMRKA RVSVRARSDA PMVQRCAEDR TVLITTYEGN HNHPLPPAAM AMASTTAAAA
401: SMLLSGSMPS ADGSLMAGSN FLARAVLPCS STVATISASA PFPTVTLDLT QTAPPPPPAS STQPQPPRPE PAQLQAALAE AARPVALPQL FGQKLYDQSK
501: LSAVQAVAGT KGSDGGALAD TVNAATAAIA SDPNFTAVLA AALTSYIGSR SGSGGAGAGG SSGTVQPLMS GGGDSCSRDD KIGEQNS
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.