Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011237_P001 | Maize | nucleus | 39.18 | 25.5 |
| EES03177 | Sorghum | nucleus | 40.21 | 23.49 |
| Os01t0289600-00 | Rice | nucleus, plastid | 37.11 | 17.52 |
| Os09t0417800-01 | Rice | nucleus | 28.35 | 17.3 |
| Os09t0417600-02 | Rice | nucleus | 27.32 | 16.21 |
| Os06t0649000-01 | Rice | nucleus | 27.84 | 16.02 |
| Os05t0137500-00 | Rice | nucleus | 37.11 | 15.19 |
| Os01t0185900-01 | Rice | nucleus | 38.14 | 14.6 |
| Os02t0181300-01 | Rice | nucleus | 25.77 | 14.37 |
| Os06t0146250-00 | Rice | nucleus | 40.21 | 12.91 |
| Os02t0770500-00 | Rice | nucleus | 36.6 | 10.94 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 35.05 | 9.55 |
| Os05t0567200-00 | Rice | nucleus | 23.71 | 7.84 |
| Os01t0246700-01 | Rice | nucleus | 6.19 | 2.91 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0P0V4K4 | ProteinID:BAS72910.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os01g0586800 |
| EnsemblPlants:Os01t0586800-00 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000393C33F | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
RICE WRKY GENE27Similar to WRKY transcription factor 5 (Fragment). (Os01t0586800-00)
Coordinates
chr1:-:22824809..22826277
Molecular Weight (calculated)
21296.1 Da
IEP (calculated)
11.298
GRAVY (calculated)
-0.728
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: QQHLRRIRGR RRRRRRAGGP RRRRPVLHDH GCDGCQWRKY GQKTAKGNPW PRGYYRCTGA PGCPVKKQVQ RCNHDTSVLV TTYDGVHNHP ITPYAAALPP
101: SSSSSSSAAV AMLASSSSSS TWSELQRAMP AAQSSWSQRN YPIQADVVAK AIWDPKFQAT VAAAVASYVR DREQSARVAG GKGAGELFNL APPC
101: SSSSSSSAAV AMLASSSSSS TWSELQRAMP AAQSSWSQRN YPIQADVVAK AIWDPKFQAT VAAAVASYVR DREQSARVAG GKGAGELFNL APPC
001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
Arabidopsis Description
WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.