Factsheet for GSMUA_Achr5P09730_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	7.02	51.55
GSMUA_Achr7P08850_001	Banana	nucleus	19.24	35.31
Os01t0586800-00	Rice	nucleus	9.55	35.05
GSMUA_Achr10P...	Banana	nucleus	17.28	32.63
GSMUA_Achr7P13400_001	Banana	nucleus	17.7	31.42
GSMUA_Achr2P18390_001	Banana	nucleus	16.15	31.34
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	15.17	30.86
GSMUA_Achr7P19340_001	Banana	nucleus	8.29	30.73
GSMUA_Achr1P05240_001	Banana	nucleus	14.04	30.67
GSMUA_Achr3P03090_001	Banana	nucleus	15.17	28.27
GSMUA_Achr2P05100_001	Banana	nucleus	7.44	27.89
GSMUA_Achr5P16460_001	Banana	nucleus	8.43	25.53
Zm00001d011237_P001	Maize	nucleus	10.53	25.17
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	7.87	25.11
GSMUA_Achr10P...	Banana	nucleus	8.15	25.0
GSMUA_Achr11P...	Banana	nucleus	14.47	24.58
EES03177	Sorghum	nucleus	11.24	24.1
GSMUA_Achr5P16750_001	Banana	nucleus	16.15	23.66
GSMUA_Achr6P05880_001	Banana	nucleus	15.73	23.53
GSMUA_Achr10P...	Banana	nucleus	16.15	23.19
GSMUA_Achr3P20290_001	Banana	nucleus	12.36	22.98
GSMUA_Achr6P02330_001	Banana	nucleus	11.66	22.49
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	8.99	22.15
GSMUA_Achr7P18820_001	Banana	nucleus	13.48	21.38
GSMUA_Achr11P...	Banana	nucleus	7.3	21.22
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	14.47	21.11
GSMUA_Achr6P13630_001	Banana	nucleus	15.45	20.99
GSMUA_Achr10P...	Banana	nucleus	15.03	20.98
GSMUA_Achr2P15200_001	Banana	nucleus	15.59	20.86
GSMUA_Achr7P05200_001	Banana	nucleus	8.01	20.36
GSMUA_Achr10P...	Banana	nucleus	13.34	19.83
GSMUA_Achr10P...	Banana	nucleus	7.87	19.44
GSMUA_Achr3P13440_001	Banana	nucleus	6.74	17.45
GSMUA_Achr1P10080_001	Banana	nucleus	8.15	17.31

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:20.5.6	Gene3D:3.10.350.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr5G09730_001	EnsemblPlants:GSMUA_Achr5P09730_001	EnsemblPlants:GSMUA_Achr5T09730_001
InterPro:IPR003657	InterPro:IPR018392	InterPro:IPR036576	InterPro:IPR036779	InterPro:LysM_dom	InterPro:LysM_dom_sf
UniProt:M0SX52	PFAM:PF01476	PFAM:PF03106	PFscan:PS50811	PFscan:PS51782	PANTHER:PTHR33414
PANTHER:PTHR33414:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002951066	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G09730_001]

Coordinates

chr5:-:6948233..6957799

Molecular Weight (calculated)

77292.0 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.344

Length

712 amino acids

Sequence
(BLAST)

001: MPRNEDEEVS PQHTLKRARV SVRARCDAPT MSDGCHWRKY GQKVAKGNPC PRAYYRCTVA PGCPVRKQVQ RCVEDLSILI STYEGTHNHP LPISATAMAS
101: TTSAAAGMLM SGSTSSTSIT SDIHGGSIGT SNNSMPQRSL TDMIAGAITS HPSFQSALAA AVTSYIGGAR GAQGAREGSI YDLQRQEQLA SPPTHAAAAI
201: SNEESQVWEG TEESHMLNPC ILPELLKRSD ERECDEPGFM VIGNVNQLHK KLSITFLIHK MEDPDSIFLS LSTLESEEFE SPDIPGKPSK QLSHEAIKSN
301: HKMASLKSMS RSLVAVPESV ASEFLSMLGK EDSLFGLSSD SDPDLLREQL WKQFEKESLA SCDDLFVPLT WVGSNCSLEE PLELPALVEG LGPIVQTKDG
401: GFLRSMNPSL FRDAENNGTL IMQVSGLIVV PAEMGSGIME ILQQLASMGI EKLSRQASKL MPLEDLTGKT SQRIAWDSAT ALDSCERSGN FVIWGLGASQ
501: NVDGRREKSK GMTLACSSKV GKDPVGTSCH ANACLLALIQ VERVFVPPKP KIYSTVSAKG NSEQEDEVET ESKPSAKAEN HEEEVIRQFK ITEVHVAGLK
601: TESSKINVPG NPKQQQSGSR WLLATGIGKS NKHPFMKSRT VAKPSKEMSA KVQPGDTLWS ISSRIHDSGA KWTELAALNP HIRNPDIIFP TVPHEVNLCL
701: TRSLPCFDVV TL

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.