Factsheet for GSMUA_Achr10P28190_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08850_001	Banana	nucleus	56.5	54.9
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	12.2	47.42
GSMUA_Achr7P13400_001	Banana	nucleus	48.54	45.64
GSMUA_Achr1P05240_001	Banana	nucleus	36.87	42.64
GSMUA_Achr7P19340_001	Banana	nucleus	16.98	33.33
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	30.5	32.86
GSMUA_Achr2P05100_001	Banana	nucleus	16.18	32.11
GSMUA_Achr2P18390_001	Banana	nucleus	30.5	31.34
GSMUA_Achr10P...	Banana	nucleus	18.3	29.74
GSMUA_Achr11P...	Banana	nucleus	32.1	28.88
GSMUA_Achr3P03090_001	Banana	nucleus	29.18	28.8
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	16.71	28.25
GSMUA_Achr11P...	Banana	nucleus	17.77	27.35
GSMUA_Achr3P20290_001	Banana	nucleus	27.59	27.15
GSMUA_Achr10P...	Banana	nucleus	19.89	26.04
GSMUA_Achr5P16460_001	Banana	nucleus	16.18	25.96
GSMUA_Achr5P16750_001	Banana	nucleus	32.89	25.51
GSMUA_Achr7P05200_001	Banana	nucleus	18.57	25.0
GSMUA_Achr6P02330_001	Banana	nucleus	24.4	24.93
GSMUA_Achr6P05880_001	Banana	nucleus	31.03	24.58
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	18.83	24.57
GSMUA_Achr10P...	Banana	nucleus	31.83	24.19
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	31.3	24.18
GSMUA_Achr7P18820_001	Banana	nucleus	28.65	24.05
GSMUA_Achr10P...	Banana	nucleus	30.5	24.01
GSMUA_Achr3P13440_001	Banana	nucleus	17.51	24.0
GSMUA_Achr10P...	Banana	nucleus	32.36	23.92
GSMUA_Achr2P15200_001	Banana	nucleus	33.16	23.5
GSMUA_Achr6P13630_001	Banana	nucleus	31.83	22.9
GSMUA_Achr1P10080_001	Banana	nucleus	19.89	22.39
GSMUA_Achr5P09730_001	Banana	nucleus	32.63	17.28

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr10G28190_001	EnsemblPlants:GSMUA_Achr10P28190_001	EnsemblPlants:GSMUA_Achr10T28190_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0RM43	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000296B909	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G28190_001]

Coordinates

chr10:-:31101522..31109495

Molecular Weight (calculated)

41372.8 Da

IEP (calculated)

7.365

GRAVY (calculated)

-0.539

Length

377 amino acids

Sequence
(BLAST)

001: MDEVREENDR LKTILAHIIK EYQHLQKQYF DVVQQEQSKR PLETTNPSDV EEPDELVSLS LGTKEPGEPR PPTEILMMSL GTGDDEVPQQ LPVKKARVTV
101: RARCDAPTMI DGCQWRKYGQ KIAKGNPCPR AYYRCTVAAG CPVRKQVQRC AEDMSILITT YQGTHNHPLP ISATAMASTA AASMHMSGSS ASEQGMGEAI
201: GSLSARQQSS YLPIPSPSPA SSYSTITLDL TAPPSSTSQL SQLGRFPCHE SRAYHDRPSQ DSFCQSILQK AIDTTAAPNL NQHPLADTIA KAITSDPNFQ
301: SAVAAAVTSY VGDHRSRNGR EGLSSFLNET YDASVIKWKR HHCAPHKMLD NSGKGIISPT LYSSPGFYGL FLHKEHM

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.