Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 10.04 | 50.52 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 49.59 | 49.79 |
| CDX97845 | Canola | nucleus | 23.77 | 48.13 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 45.29 | 46.43 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 33.2 | 46.29 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 50.2 | 46.05 |
| GSMUA_Achr10P... | Banana | nucleus | 45.49 | 44.76 |
| GSMUA_Achr10P... | Banana | nucleus | 46.52 | 44.51 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 47.54 | 44.27 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 34.22 | 43.72 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 46.31 | 42.24 |
| PGSC0003DMT400056725 | Potato | nucleus | 42.01 | 41.33 |
| Solyc02g032950.2.1 | Tomato | nucleus | 42.01 | 41.16 |
| KRH36485 | Soybean | nucleus | 44.26 | 39.93 |
| GSMUA_Achr11P... | Banana | nucleus | 34.02 | 39.62 |
| PGSC0003DMT400042400 | Potato | nucleus | 44.88 | 39.6 |
| KRH11472 | Soybean | nucleus | 45.08 | 39.5 |
| Solyc02g080890.2.1 | Tomato | nucleus | 44.26 | 39.27 |
| KRH51128 | Soybean | nucleus, plastid | 41.19 | 38.88 |
| VIT_12s0059g00880.t01 | Wine grape | nucleus | 46.93 | 38.62 |
| PGSC0003DMT400038852 | Potato | nucleus | 44.06 | 38.6 |
| KRH02033 | Soybean | nucleus | 38.52 | 38.45 |
| CDX94553 | Canola | nucleus | 38.11 | 37.88 |
| GSMUA_Achr2P18390_001 | Banana | nucleus | 28.48 | 37.87 |
| AT4G22070.1 | Thale cress | nucleus | 41.39 | 37.55 |
| AT1G62300.1 | Thale cress | nucleus | 42.42 | 37.43 |
| CDX82900 | Canola | nucleus | 39.96 | 37.43 |
| CDY16669 | Canola | nucleus | 37.7 | 37.4 |
| CDY19535 | Canola | nucleus | 42.21 | 37.32 |
| CDY12937 | Canola | nucleus | 42.21 | 37.32 |
| CDX90863 | Canola | nucleus | 38.52 | 37.08 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 14.55 | 36.98 |
| Bra027057.1-P | Field mustard | nucleus | 41.8 | 36.96 |
| CDY21301 | Canola | nucleus | 38.32 | 36.88 |
| CDY24892 | Canola | nucleus | 39.34 | 36.64 |
| Bra013584.1-P | Field mustard | nucleus | 40.37 | 36.62 |
| Bra029491.1-P | Field mustard | nucleus | 36.89 | 36.59 |
| Bra000793.1-P | Field mustard | nucleus | 38.52 | 36.22 |
| AT4G04450.1 | Thale cress | nucleus | 39.14 | 36.17 |
| Bra034482.1-P | Field mustard | nucleus | 36.48 | 35.11 |
| CDY08634 | Canola | nucleus | 36.07 | 34.99 |
| Solyc07g051840.2.1 | Tomato | nucleus | 44.88 | 34.71 |
| KRH25355 | Soybean | nucleus | 42.83 | 34.04 |
| KRH22585 | Soybean | nucleus | 42.42 | 33.71 |
| GSMUA_Achr10P... | Banana | nucleus | 15.78 | 33.19 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 22.13 | 33.13 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 38.52 | 32.7 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 12.7 | 32.63 |
| Zm00001d039245_P001 | Maize | nucleus | 36.07 | 32.53 |
| GSMUA_Achr7P08850_001 | Banana | nucleus | 25.61 | 32.22 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 38.11 | 32.07 |
| KRH56160 | Soybean | nucleus | 40.78 | 31.69 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 15.16 | 31.49 |
| GSMUA_Achr11P... | Banana | nucleus | 15.78 | 31.43 |
| GSMUA_Achr10P... | Banana | nucleus | 24.18 | 31.3 |
| EES02155 | Sorghum | nucleus | 36.48 | 31.23 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 38.52 | 29.89 |
| TraesCS3D01G173300.2 | Wheat | plastid | 38.52 | 29.56 |
| GSMUA_Achr10P... | Banana | nucleus | 17.42 | 29.51 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 16.6 | 29.45 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 16.8 | 29.29 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 13.11 | 28.7 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 23.16 | 28.18 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 16.6 | 28.03 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 25.0 | 27.17 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 21.31 | 27.15 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 19.88 | 26.29 |
| GSMUA_Achr10P... | Banana | nucleus | 25.41 | 25.89 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 17.42 | 25.37 |
| Os01t0246700-01 | Rice | nucleus | 19.88 | 23.49 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 21.11 | 14.47 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr6G07620_001 | EnsemblPlants:GSMUA_Achr6P07620_001 | EnsemblPlants:GSMUA_Achr6T07620_001 | InterPro:IPR003657 |
| InterPro:IPR036576 | UniProt:M0T511 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 |
| SMART:SM00774 | SUPFAM:SSF118290 | SignalP:SignalP-noTM | UniParc:UPI000296A987 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G07620_001]
Coordinates
chr6:-:5173925..5176064
Molecular Weight (calculated)
53056.4 Da
IEP (calculated)
7.343
GRAVY (calculated)
-0.578
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRGSAAAG LTLATASSLL LTSPSHQNQP MNSDHHRSGV GFKDAHVAEA STPLPRENRA VVISEMDFFS NEKKKMTMTS CAAPELDLKV PSLCIKREDL
101: SVNTGLHLSN TRSDLSTVDD GMSPPEDDKE GKSELTAVQA ELARMNQENN KLRLMLNQLT TNYNALQMQL VALTQQRRTS GNPQEPENKK MEEKSHDEHD
201: GAVVPRRQFM DLGPGGDIDE PSHSSSTSRD PCLSLRSHTE VSLDHEKHVR EDDRAEHGWN SNKTPRLAPS KSAERAEDAT MRKARVSVRA RSEAPTITDG
301: CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAD DRSILITTYE GTHSHPLPPA AIPMASTTSA AASMLVSGFS GLQMSPEMDP AQLAHPKAQS
401: VAPPSLADTV SAVITADPNF TAAVAAAISS IIGGAGNHRT GNDDNSHSKP IILSFLFFSL VAYYFRGSKT KLLPHSCHHF VHASALDQ
101: SVNTGLHLSN TRSDLSTVDD GMSPPEDDKE GKSELTAVQA ELARMNQENN KLRLMLNQLT TNYNALQMQL VALTQQRRTS GNPQEPENKK MEEKSHDEHD
201: GAVVPRRQFM DLGPGGDIDE PSHSSSTSRD PCLSLRSHTE VSLDHEKHVR EDDRAEHGWN SNKTPRLAPS KSAERAEDAT MRKARVSVRA RSEAPTITDG
301: CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAD DRSILITTYE GTHSHPLPPA AIPMASTTSA AASMLVSGFS GLQMSPEMDP AQLAHPKAQS
401: VAPPSLADTV SAVITADPNF TAAVAAAISS IIGGAGNHRT GNDDNSHSKP IILSFLFFSL VAYYFRGSKT KLLPHSCHHF VHASALDQ
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.