Factsheet for Os01t0246700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G167200.1	Wheat	nucleus	77.48	55.65
TraesCS3B01G199000.2	Wheat	nucleus	77.0	54.83
TraesCS3D01G173300.2	Wheat	plastid	77.72	50.47
HORVU3Hr1G033740.2	Barley	nucleus, plastid	76.27	50.08
Zm00001d039245_P001	Maize	nucleus	52.54	40.11
EES02155	Sorghum	nucleus	54.96	39.82
Solyc02g032950.2.1	Tomato	nucleus	24.46	20.28
VIT_10s0116g01200.t01	Wine grape	nucleus	26.15	20.19
GSMUA_Achr5P16750_001	Banana	nucleus	23.49	19.96
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	23.49	19.88
PGSC0003DMT400056725	Potato	nucleus	23.73	19.76
PGSC0003DMT400042400	Potato	nucleus	25.67	19.17
Solyc02g080890.2.1	Tomato	nucleus	25.42	19.09
GSMUA_Achr6P13630_001	Banana	nucleus	23.97	18.89
GSMUA_Achr10P...	Banana	nucleus	23.0	18.63
GSMUA_Achr2P15200_001	Banana	nucleus	23.97	18.61
VIT_12s0059g00880.t01	Wine grape	nucleus	26.63	18.55
GSMUA_Achr10P...	Banana	nucleus	21.79	18.15
GSMUA_Achr6P05880_001	Banana	nucleus	20.58	17.86
KRH11472	Soybean	nucleus	23.49	17.41
Bra034482.1-P	Field mustard	nucleus	21.31	17.36
KRH36485	Soybean	nucleus	22.03	16.82
GSMUA_Achr3P03090_001	Banana	nucleus	15.5	16.75
PGSC0003DMT400038852	Potato	nucleus	22.52	16.7
AT1G62300.1	Thale cress	nucleus	22.28	16.64
CDX82900	Canola	nucleus	20.58	16.31
CDY08634	Canola	nucleus	19.85	16.3
KRH22585	Soybean	nucleus	24.21	16.29
CDY12937	Canola	nucleus	21.55	16.12
CDY19535	Canola	nucleus	21.55	16.12
AT4G22070.1	Thale cress	nucleus	20.82	15.99
Bra027057.1-P	Field mustard	nucleus	21.31	15.94
Bra013584.1-P	Field mustard	nucleus	20.58	15.8
Solyc07g051840.2.1	Tomato	nucleus	23.97	15.69
CDX94553	Canola	nucleus	18.64	15.68
KRH51128	Soybean	nucleus, plastid	19.61	15.67
CDY16669	Canola	nucleus	18.64	15.65
CDY24892	Canola	nucleus	19.85	15.65
KRH56160	Soybean	nucleus	23.49	15.45
KRH02033	Soybean	nucleus	18.16	15.34
Bra029491.1-P	Field mustard	nucleus	18.16	15.24
Bra000793.1-P	Field mustard	nucleus	19.13	15.22
CDY21301	Canola	nucleus	18.64	15.19
AT4G04450.1	Thale cress	nucleus	19.37	15.15
KRH25355	Soybean	nucleus	22.52	15.15
CDX90863	Canola	nucleus	18.4	14.99
Os05t0567200-00	Rice	nucleus	19.13	13.46
Os01t0185900-01	Rice	nucleus	15.25	12.43
Os05t0137500-00	Rice	nucleus	13.32	11.6
Os06t0146250-00	Rice	nucleus	16.46	11.26
Os06t0649000-01	Rice	nucleus	8.96	10.98
Os02t0181300-01	Rice	nucleus	8.47	10.06
Os09t0417600-02	Rice	nucleus	7.75	9.79
Os01t0289600-00	Rice	nucleus, plastid	9.69	9.73
CDX97845	Canola	nucleus	5.33	9.13
Os02t0770500-00	Rice	nucleus	13.8	8.78
Os09t0417800-01	Rice	nucleus	4.84	6.29
Os01t0586800-00	Rice	nucleus	2.91	6.19

Protein Annotations

MapMan:35.2	ProteinID:BAD81487.1	ProteinID:BAE95822.1	ProteinID:BAS71317.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:Os01g0246700	EnsemblPlants:Os01t0246700-01
PANTHER:PTHR31429	PANTHER:PTHR31429:SF31	UniProt:Q5NAL3	UniParc:UPI000049E79F	SEG:seg	:

Description

WRKY GENE1Similar to WRKY transcription factor 1. (Os01t0246700-01)

Coordinates

chr1:+:8084184..8086980

Molecular Weight (calculated)

42150.7 Da

IEP (calculated)

4.967

GRAVY (calculated)

-0.579

Length

413 amino acids

Sequence
(BLAST)

001: MDKGHLGGGG GGGGGLLALD ASPRPLGFLN LLSPPPFHRS TMEADDSGGG GGRARRSVEV DFFSDEKKNM KKSRVSGGVA AEADDAKGPA AAGLAIKKED
101: LTINLLPAGN NARSDRSMVV DDDAASRPDH EEKSRSSNEL AAMQAELGRM NEENQRLRGM LTQVTTSYQA LQMHLVALMQ QRPQMMQPPT QPEPPPPHQD
201: GKAEGAVVPR QFLDLGPSSG AGGEAAEEPS NSSTEAGSPR RSSSTGNKDQ ERGDSPDAPP GAPNAVPLNA ARPGAPAPQF QVPLPGGGMA PAFAVPPQVL
301: YNQSKFSGLQ MSSDSAEAAA AAAAAAQFAQ PRPPIGQLPG PLSDTVSAAA AAITADPNFT VALAAAITSI IGGQHAAAAG NSNANNTNTN TTSNTNNTSS
401: NNTTSNNTNS ETQ

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.