Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034482.1-P | Field mustard | nucleus | 92.05 | 91.32 |
| CDY24892 | Canola | nucleus | 84.1 | 80.73 |
| CDY12937 | Canola | nucleus | 80.12 | 73.01 |
| CDY19535 | Canola | nucleus | 79.92 | 72.83 |
| AT1G62300.1 | Thale cress | nucleus | 79.72 | 72.51 |
| CDX86714 | Canola | nucleus | 9.54 | 56.47 |
| CDX97845 | Canola | nucleus | 25.45 | 53.11 |
| PGSC0003DMT400056725 | Potato | nucleus | 44.73 | 45.36 |
| CDX82900 | Canola | nucleus | 46.92 | 45.3 |
| Solyc02g032950.2.1 | Tomato | nucleus | 44.73 | 45.18 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 47.71 | 44.86 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 31.21 | 44.86 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 33.6 | 44.24 |
| KRH11472 | Soybean | nucleus | 48.11 | 43.45 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 41.95 | 43.42 |
| KRH36485 | Soybean | nucleus | 46.52 | 43.25 |
| Solyc02g080890.2.1 | Tomato | nucleus | 46.92 | 42.91 |
| PGSC0003DMT400042400 | Potato | nucleus | 46.72 | 42.5 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 44.73 | 42.29 |
| KRH02033 | Soybean | nucleus | 40.56 | 41.72 |
| CDY21301 | Canola | nucleus | 41.95 | 41.62 |
| GSMUA_Achr10P... | Banana | nucleus | 40.95 | 41.53 |
| CDX90863 | Canola | nucleus | 41.55 | 41.22 |
| KRH51128 | Soybean | nucleus, plastid | 42.15 | 41.01 |
| CDX94553 | Canola | nucleus | 38.97 | 39.92 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 41.55 | 39.89 |
| GSMUA_Achr10P... | Banana | nucleus | 40.36 | 39.8 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 37.57 | 39.71 |
| CDY16669 | Canola | nucleus | 38.57 | 39.43 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 34.99 | 36.07 |
| Zm00001d039245_P001 | Maize | nucleus | 35.98 | 33.46 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 37.38 | 32.7 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 37.57 | 32.59 |
| EES02155 | Sorghum | nucleus | 35.98 | 31.75 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 37.77 | 30.21 |
| TraesCS3D01G173300.2 | Wheat | plastid | 37.38 | 29.56 |
| CDY22006 | Canola | nucleus | 28.43 | 29.18 |
| CDY68857 | Canola | nucleus | 21.27 | 28.92 |
| CDY07121 | Canola | nucleus | 28.43 | 28.89 |
| CDX75196 | Canola | nucleus | 15.9 | 28.27 |
| CDY11652 | Canola | nucleus | 21.27 | 27.94 |
| CDY56082 | Canola | nucleus | 21.27 | 27.94 |
| CDX81493 | Canola | nucleus | 17.1 | 27.74 |
| CDY22299 | Canola | nucleus | 15.11 | 26.21 |
| CDY67287 | Canola | nucleus | 15.11 | 26.21 |
| CDX72327 | Canola | nucleus | 14.71 | 25.96 |
| CDY39879 | Canola | nucleus | 15.71 | 25.73 |
| CDX96044 | Canola | nucleus | 16.7 | 25.61 |
| CDX88573 | Canola | nucleus | 15.11 | 25.25 |
| CDX68787 | Canola | nucleus | 15.9 | 25.08 |
| CDY01891 | Canola | nucleus | 16.3 | 25.0 |
| CDY26717 | Canola | nucleus | 14.12 | 24.74 |
| CDX87347 | Canola | nucleus | 14.71 | 24.67 |
| CDX79347 | Canola | nucleus | 14.51 | 24.5 |
| CDX67971 | Canola | nucleus | 14.12 | 23.91 |
| CDX96692 | Canola | nucleus | 23.66 | 23.02 |
| CDX83804 | Canola | nucleus | 23.46 | 22.91 |
| CDX81900 | Canola | nucleus | 23.46 | 22.74 |
| CDY21693 | Canola | nucleus | 23.06 | 22.35 |
| CDY70096 | Canola | nucleus | 15.31 | 22.32 |
| CDY28692 | Canola | nucleus | 23.66 | 22.12 |
| CDX70593 | Canola | nucleus | 22.86 | 21.86 |
| CDY63770 | Canola | nucleus | 22.27 | 21.79 |
| CDX78611 | Canola | nucleus | 22.66 | 21.63 |
| CDX69548 | Canola | nucleus | 18.09 | 21.06 |
| CDX85563 | Canola | nucleus | 12.92 | 20.97 |
| CDX69549 | Canola | nucleus | 21.87 | 19.96 |
| Os01t0246700-01 | Rice | nucleus | 16.3 | 19.85 |
| CDX85052 | Canola | nucleus | 21.67 | 19.82 |
| CDY19255 | Canola | nucleus | 8.75 | 18.49 |
| CDY72612 | Canola | nucleus | 7.16 | 14.94 |
| CDX86713 | Canola | nucleus | 2.39 | 10.17 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078F6F9 | UniProt:A0A078F6F9 | EnsemblPlants:CDY08634 | ProteinID:CDY08634 |
| ProteinID:CDY08634.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00000453001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE16D7 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC04g19430DBnaC04g19430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6F9]
Coordinates
chrLK031987:-:270917..273638
Molecular Weight (calculated)
55097.0 Da
IEP (calculated)
7.072
GRAVY (calculated)
-0.811
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIGWSGLTL DSSSLDLVNP KRFKSNNTHR RFSTPLTMST TGDDVDDNKT NISNAASVRD RQDNDLSSGV AGENDRAVPG EVDFFSDEKS RVCRDNVEDA
101: GFRVKKEVQD DRTDVNTGLN LRIRSDQSVT DDEESYEMEN KRAKNESIKL QDELKKVTIE NQKLRELLTQ ASNSYTSLQI HIVSLMQQQQ KQQNKAIEAT
201: ENHDETIVPR QFLDLVPSRA PGEAEVVSNS STEDRTRSGG SSAAERRNNE VRDGKRLGRE ESPETESNKL QKVNNSSPTT FDQPAEAIMR KARVSVRASS
301: EAPMIRDGCQ WRKYGQKMAK GNPFPRAYYR CTMATGCPVR KQGNHNHPLP PAAVAMASTT TAAANMLLSG SMSSHDGMMN PTNLLARAVL PCSTNMATIS
401: ASAPFPTVTL DLTHSPPPPN GSNSSPSTAA ANNNHHHNSL MYPPQQQQMT NIPPAALSQP HAVANSIPAL TTHPNFTAAL AAVITSMING SNHHDGERNN
501: KNH
101: GFRVKKEVQD DRTDVNTGLN LRIRSDQSVT DDEESYEMEN KRAKNESIKL QDELKKVTIE NQKLRELLTQ ASNSYTSLQI HIVSLMQQQQ KQQNKAIEAT
201: ENHDETIVPR QFLDLVPSRA PGEAEVVSNS STEDRTRSGG SSAAERRNNE VRDGKRLGRE ESPETESNKL QKVNNSSPTT FDQPAEAIMR KARVSVRASS
301: EAPMIRDGCQ WRKYGQKMAK GNPFPRAYYR CTMATGCPVR KQGNHNHPLP PAAVAMASTT TAAANMLLSG SMSSHDGMMN PTNLLARAVL PCSTNMATIS
401: ASAPFPTVTL DLTHSPPPPN GSNSSPSTAA ANNNHHHNSL MYPPQQQQMT NIPPAALSQP HAVANSIPAL TTHPNFTAAL AAVITSMING SNHHDGERNN
501: KNH
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.