Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010220.1-P | Field mustard | nucleus | 96.42 | 96.1 |
| CDX72327 | Canola | nucleus | 76.55 | 82.46 |
| CDX75196 | Canola | nucleus | 74.92 | 81.27 |
| CDX68787 | Canola | nucleus | 83.71 | 80.56 |
| CDY70096 | Canola | nucleus | 75.57 | 67.25 |
| AT2G25000.1 | Thale cress | nucleus | 57.33 | 64.94 |
| CDX86714 | Canola | nucleus | 14.01 | 50.59 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 31.6 | 50.52 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 30.94 | 50.0 |
| KRH61669 | Soybean | nucleus | 33.22 | 46.36 |
| PGSC0003DMT400019058 | Potato | nucleus | 39.09 | 45.98 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 34.53 | 45.11 |
| Solyc08g067360.2.1 | Tomato | nucleus | 37.78 | 44.96 |
| PGSC0003DMT400019061 | Potato | nucleus | 36.81 | 44.66 |
| GSMUA_Achr10P... | Banana | nucleus | 33.55 | 44.4 |
| Solyc08g067340.2.1 | Tomato | nucleus | 36.48 | 44.27 |
| KRH15674 | Soybean | nucleus | 40.39 | 43.97 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 44.95 | 43.53 |
| GSMUA_Achr11P... | Banana | nucleus | 34.53 | 43.27 |
| CDY22299 | Canola | nucleus | 40.39 | 42.76 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 24.1 | 42.53 |
| CDY67287 | Canola | nucleus | 40.07 | 42.41 |
| CDX88573 | Canola | nucleus | 41.04 | 41.86 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 38.11 | 41.79 |
| CDX67971 | Canola | nucleus | 40.39 | 41.75 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 37.13 | 41.45 |
| CDX87347 | Canola | nucleus | 40.39 | 41.33 |
| CDX79347 | Canola | nucleus | 40.07 | 41.28 |
| GSMUA_Achr10P... | Banana | nucleus | 38.11 | 40.62 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 29.32 | 40.36 |
| KRH05350 | Soybean | nucleus | 40.07 | 39.42 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 34.53 | 36.68 |
| KRH52329 | Soybean | nucleus | 35.83 | 35.6 |
| Os02t0181300-01 | Rice | nucleus | 39.74 | 35.06 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 37.78 | 34.63 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 39.41 | 34.57 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 39.09 | 34.48 |
| Zm00001d053746_P001 | Maize | nucleus | 35.83 | 34.27 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 36.48 | 34.25 |
| Os06t0649000-01 | Rice | nucleus | 37.46 | 34.12 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 36.48 | 34.04 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 35.83 | 33.95 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 35.83 | 33.74 |
| Zm00001d015515_P001 | Maize | nucleus | 38.11 | 33.72 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 29.64 | 33.58 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 35.18 | 33.54 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 35.5 | 33.44 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 38.44 | 33.43 |
| EER90124 | Sorghum | nucleus | 37.13 | 33.33 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 35.5 | 33.33 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 35.5 | 33.23 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 34.53 | 33.23 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 28.99 | 32.84 |
| EER88729 | Sorghum | nucleus | 37.13 | 32.76 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 37.78 | 32.68 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 35.18 | 32.63 |
| Zm00001d020495_P001 | Maize | nucleus | 28.01 | 32.33 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 34.85 | 32.33 |
| Zm00001d046805_P001 | Maize | nucleus | 36.81 | 32.19 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 30.29 | 32.18 |
| EES04642 | Sorghum | nucleus | 38.11 | 32.14 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 34.53 | 32.02 |
| Zm00001d020492_P001 | Maize | nucleus | 31.27 | 31.79 |
| KXG35639 | Sorghum | nucleus | 30.29 | 31.53 |
| Zm00001d036726_P001 | Maize | nucleus | 35.18 | 31.4 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 35.5 | 31.32 |
| Os09t0417600-02 | Rice | nucleus | 33.22 | 31.19 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 33.22 | 30.91 |
| EER98905 | Sorghum | nucleus, plastid | 32.25 | 30.28 |
| TraesCS7D01G497300.1 | Wheat | plastid | 35.83 | 29.57 |
| Os09t0417800-01 | Rice | nucleus | 29.97 | 28.93 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 33.55 | 27.76 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 36.16 | 27.34 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 34.2 | 26.85 |
| Zm00001d005749_P001 | Maize | nucleus | 30.29 | 26.5 |
| CDX97845 | Canola | nucleus | 18.24 | 23.24 |
| CDY26717 | Canola | nucleus | 19.22 | 20.56 |
| CDX81493 | Canola | nucleus | 19.22 | 19.03 |
| CDY11652 | Canola | nucleus | 23.13 | 18.54 |
| CDX96044 | Canola | nucleus | 19.54 | 18.29 |
| CDY01891 | Canola | nucleus | 19.54 | 18.29 |
| CDY68857 | Canola | nucleus | 21.17 | 17.57 |
| CDY22006 | Canola | nucleus | 28.01 | 17.55 |
| CDX94553 | Canola | nucleus | 28.01 | 17.52 |
| CDY16669 | Canola | nucleus | 28.01 | 17.48 |
| CDY56082 | Canola | nucleus | 21.5 | 17.23 |
| CDY12937 | Canola | nucleus | 30.94 | 17.21 |
| CDY19535 | Canola | nucleus | 30.94 | 17.21 |
| CDY07121 | Canola | nucleus | 27.69 | 17.17 |
| CDX82900 | Canola | nucleus | 28.99 | 17.08 |
| CDY24892 | Canola | nucleus | 28.66 | 16.79 |
| CDX90863 | Canola | nucleus | 27.36 | 16.57 |
| CDY21301 | Canola | nucleus | 27.36 | 16.57 |
| CDX69548 | Canola | nucleus | 22.48 | 15.97 |
| CDX85563 | Canola | nucleus | 15.96 | 15.81 |
| CDX70593 | Canola | nucleus | 27.04 | 15.78 |
| CDX78611 | Canola | nucleus | 27.04 | 15.75 |
| CDY08634 | Canola | nucleus | 25.73 | 15.71 |
| CDY63770 | Canola | nucleus | 26.06 | 15.56 |
| CDX96692 | Canola | nucleus | 26.06 | 15.47 |
| CDX81900 | Canola | nucleus | 26.06 | 15.41 |
| CDY21693 | Canola | nucleus | 26.06 | 15.41 |
| CDX83804 | Canola | nucleus | 25.73 | 15.34 |
| CDX69549 | Canola | nucleus | 27.04 | 15.06 |
| CDX85052 | Canola | nucleus | 26.71 | 14.91 |
| CDY28692 | Canola | nucleus | 25.73 | 14.68 |
| CDY19255 | Canola | nucleus | 10.1 | 13.03 |
| CDX86713 | Canola | nucleus | 3.26 | 8.47 |
| CDY72612 | Canola | nucleus | 5.54 | 7.05 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HRE9 | UniProt:A0A078HRE9 | EnsemblPlants:CDY39879 | ProteinID:CDY39879 |
| ProteinID:CDY39879.1 | ncoils:Coil | GO:GO:0002237 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 |
| GO:GO:0031347 | GO:GO:0042742 | GO:GO:0043565 | GO:GO:0050832 | EnsemblPlantsGene:GSBRNA2T00068714001 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF32 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0004EEDD81 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
BnaC03g67380DBnaC03g67380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRE9]
Coordinates
chrLK032459:+:69007..70978
Molecular Weight (calculated)
34311.0 Da
IEP (calculated)
7.940
GRAVY (calculated)
-0.831
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCSSSLDIS LNLNINAFDR SFPAKLPEEE VKVSTSAGVE RKWLVKDKSA SELREELNRV YSENKKIKET LETVCEKYYA LHHHLEKLQS RKSPGIDHIE
101: QPTKKRKQDP ADFLGFPNGK TENSSSNQDH HHQQYEQKNQ LLSCKRPITD SFNEAKVSTV YVPADSSDTS LTVKDGYQWR KYGQKVTRDN PSPRAYFRCS
201: FAPSCPVKKK VQRSAEDPSI LVATYEGTHN HLGPNASEGD ATSQGGSSTV TLDMVHGGQR LALEKNERGT MQEVLVQQMA SSLTNDSNFT AALAAAITGR
301: LMEQSRT
101: QPTKKRKQDP ADFLGFPNGK TENSSSNQDH HHQQYEQKNQ LLSCKRPITD SFNEAKVSTV YVPADSSDTS LTVKDGYQWR KYGQKVTRDN PSPRAYFRCS
201: FAPSCPVKKK VQRSAEDPSI LVATYEGTHN HLGPNASEGD ATSQGGSSTV TLDMVHGGQR LALEKNERGT MQEVLVQQMA SSLTNDSNFT AALAAAITGR
301: LMEQSRT
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.