Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G232800.1 | Wheat | nucleus | 72.38 | 85.5 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 71.36 | 84.29 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 68.54 | 81.21 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 67.77 | 80.06 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 71.61 | 75.47 |
| Os09t0417600-02 | Rice | nucleus | 52.94 | 63.3 |
| EER98905 | Sorghum | nucleus, plastid | 50.9 | 60.86 |
| Zm00001d020492_P001 | Maize | nucleus | 46.04 | 59.6 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 23.27 | 52.3 |
| Zm00001d005749_P001 | Maize | nucleus | 43.48 | 48.43 |
| Bra019123.1-P | Field mustard | nucleus | 22.51 | 45.36 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 33.5 | 42.12 |
| Solyc12g042590.1.1 | Tomato | nucleus | 22.76 | 41.2 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 29.92 | 40.48 |
| PGSC0003DMT400073710 | Potato | nucleus | 22.25 | 40.09 |
| KRH44560 | Soybean | nucleus | 31.46 | 39.3 |
| KRH47344 | Soybean | nucleus | 31.2 | 39.23 |
| KRH23643 | Soybean | nucleus | 30.95 | 39.16 |
| CDY22299 | Canola | nucleus | 28.64 | 38.62 |
| Bra008435.1-P | Field mustard | nucleus | 28.64 | 38.62 |
| AT1G80840.1 | Thale cress | nucleus | 29.67 | 38.41 |
| CDY67287 | Canola | nucleus | 28.39 | 38.28 |
| KRH61669 | Soybean | nucleus | 21.48 | 38.18 |
| CDX67971 | Canola | nucleus | 28.9 | 38.05 |
| Bra003588.1-P | Field mustard | nucleus | 28.9 | 38.05 |
| Bra035148.1-P | Field mustard | nucleus | 29.16 | 38.0 |
| CDX87347 | Canola | nucleus | 29.16 | 38.0 |
| CDX88573 | Canola | nucleus | 29.16 | 37.87 |
| KRH09652 | Soybean | nucleus | 31.46 | 37.27 |
| CDX79347 | Canola | nucleus | 28.39 | 37.25 |
| Solyc08g067340.2.1 | Tomato | nucleus | 24.04 | 37.15 |
| KRH15674 | Soybean | nucleus | 26.6 | 36.88 |
| CDX72327 | Canola | nucleus | 26.6 | 36.49 |
| PGSC0003DMT400019058 | Potato | nucleus | 24.3 | 36.4 |
| PGSC0003DMT400019061 | Potato | nucleus | 23.53 | 36.36 |
| CDX75196 | Canola | nucleus | 25.83 | 35.69 |
| Solyc08g067360.2.1 | Tomato | nucleus | 23.53 | 35.66 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 28.9 | 35.65 |
| PGSC0003DMT400073396 | Potato | nucleus | 32.74 | 35.56 |
| Solyc06g068460.2.1 | Tomato | nucleus | 32.23 | 35.0 |
| Bra010220.1-P | Field mustard | nucleus | 27.37 | 34.74 |
| CDY39879 | Canola | nucleus | 26.85 | 34.2 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 27.88 | 34.17 |
| KRH05350 | Soybean | nucleus | 27.11 | 33.97 |
| AT4G31800.1 | Thale cress | nucleus | 26.6 | 33.55 |
| AT2G25000.1 | Thale cress | nucleus | 23.02 | 33.21 |
| CDX68787 | Canola | nucleus | 26.6 | 32.6 |
| Bra011299.1-P | Field mustard | nucleus | 26.34 | 32.49 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 29.16 | 32.29 |
| PGSC0003DMT400051047 | Potato | nucleus | 29.16 | 32.11 |
| Solyc03g116890.2.1 | Tomato | nucleus | 27.88 | 31.14 |
| CDY70096 | Canola | nucleus | 26.6 | 30.14 |
| Bra023983.1-P | Field mustard | nucleus | 26.6 | 30.14 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 30.18 | 29.06 |
| KRH52329 | Soybean | nucleus | 22.76 | 28.8 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 21.48 | 13.79 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 18.41 | 13.69 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 21.74 | 13.51 |
| HORVU6Hr1G079710.2 | Barley | nucleus | 17.65 | 11.13 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287RK25 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009617 | GO:GO:0009620 | GO:GO:0009719 |
| GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G065420 | EnsemblPlants:HORVU5Hr1G065420.15 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000B460A5C | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:-:500714113..500715667
Molecular Weight (calculated)
42214.0 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.478
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: LCSCLIPPTP TSGQNSRRAE ACMCCCWTMD TAPVCLDLMV GRPMDHEPSP ARCTGMGTQA CIASSPCGRA PPITNDEAKI LEAKLTQVSE ENRRLTEMIA
101: YLHSNQAARQ RLDGDGEQPA STAASPTPPA SKKRSRESVD TSHSCDANSN RNARTAAPEH VDVDSPLSNA TCRRIKVKKV CTRIDPSDTS LVVKDGYQWR
201: KYGQKVTRDN PSPRAYFRCA FAPSCPVKKK VPCKSRSNST SIVRPSTVAE QLMLWSVANF LVGSMVVQVQ RSAEDSSVVE ATYEGEHNHQ RPTRAGERPS
301: CAAGSGGSVP CSISINSSGP TITLDLTKDG GGMQVVEAAG EAQPNLKKVC REVASPEFQR ALVEQMAREL TGDRNFIDAL AAAILRKLPD Y
101: YLHSNQAARQ RLDGDGEQPA STAASPTPPA SKKRSRESVD TSHSCDANSN RNARTAAPEH VDVDSPLSNA TCRRIKVKKV CTRIDPSDTS LVVKDGYQWR
201: KYGQKVTRDN PSPRAYFRCA FAPSCPVKKK VPCKSRSNST SIVRPSTVAE QLMLWSVANF LVGSMVVQVQ RSAEDSSVVE ATYEGEHNHQ RPTRAGERPS
301: CAAGSGGSVP CSISINSSGP TITLDLTKDG GGMQVVEAAG EAQPNLKKVC REVASPEFQR ALVEQMAREL TGDRNFIDAL AAAILRKLPD Y
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.