Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g042590.1.1 | Tomato | nucleus | 91.24 | 91.67 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 40.55 | 45.83 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 45.62 | 42.13 |
| GSMUA_Achr10P... | Banana | nucleus | 41.94 | 39.22 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 34.1 | 38.95 |
| PGSC0003DMT400019061 | Potato | nucleus | 44.24 | 37.94 |
| PGSC0003DMT400019058 | Potato | nucleus | 45.62 | 37.93 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 29.95 | 37.36 |
| GSMUA_Achr11P... | Banana | nucleus | 40.09 | 35.51 |
| PGSC0003DMT400051047 | Potato | nucleus | 55.76 | 34.08 |
| GSMUA_Achr10P... | Banana | nucleus | 44.7 | 33.68 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 34.56 | 33.63 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 42.4 | 33.45 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 42.4 | 32.86 |
| PGSC0003DMT400073396 | Potato | nucleus | 53.46 | 32.22 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 39.63 | 29.76 |
| Zm00001d020492_P001 | Maize | nucleus | 41.01 | 29.47 |
| Os09t0417600-02 | Rice | nucleus | 44.24 | 29.36 |
| Zm00001d020495_P001 | Maize | nucleus | 35.94 | 29.32 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 46.08 | 28.74 |
| Zm00001d053746_P001 | Maize | nucleus | 42.4 | 28.66 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 46.08 | 28.57 |
| Os06t0649000-01 | Rice | nucleus | 44.24 | 28.49 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 35.48 | 28.41 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 46.08 | 28.17 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 43.32 | 28.06 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 45.62 | 28.05 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 35.02 | 28.04 |
| Os02t0181300-01 | Rice | nucleus | 44.7 | 27.87 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 41.94 | 27.83 |
| EER98905 | Sorghum | nucleus, plastid | 41.94 | 27.83 |
| KXG35639 | Sorghum | nucleus | 37.79 | 27.8 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 41.47 | 27.61 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 41.47 | 27.52 |
| Zm00001d015515_P001 | Maize | nucleus | 43.78 | 27.38 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 41.47 | 27.36 |
| Zm00001d046805_P001 | Maize | nucleus | 44.24 | 27.35 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 40.55 | 27.33 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 41.01 | 27.3 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 40.09 | 27.27 |
| EER90124 | Sorghum | nucleus | 42.86 | 27.19 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 41.47 | 27.19 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 41.47 | 27.19 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 40.55 | 27.16 |
| EES04642 | Sorghum | nucleus | 45.16 | 26.92 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 40.55 | 26.59 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 40.09 | 26.52 |
| Zm00001d036726_P001 | Maize | nucleus | 41.94 | 26.45 |
| EER88729 | Sorghum | nucleus | 42.4 | 26.44 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 40.09 | 26.36 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 40.55 | 25.29 |
| TraesCS7D01G497300.1 | Wheat | plastid | 42.4 | 24.73 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 32.72 | 24.57 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 41.47 | 24.26 |
| Zm00001d005749_P001 | Maize | nucleus | 38.71 | 23.93 |
| Os09t0417800-01 | Rice | nucleus | 34.56 | 23.58 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 41.94 | 22.41 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 40.09 | 22.25 |
| PGSC0003DMT400076591 | Potato | nucleus | 32.26 | 16.95 |
| PGSC0003DMT400017859 | Potato | nucleus | 29.49 | 14.45 |
| PGSC0003DMT400056725 | Potato | nucleus | 32.72 | 14.31 |
| PGSC0003DMT400038852 | Potato | nucleus | 35.02 | 13.64 |
| PGSC0003DMT400042400 | Potato | nucleus | 31.8 | 12.48 |
| PGSC0003DMT400046570 | Potato | nucleus | 29.95 | 12.38 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1CSI6 | PFAM:PF03106 |
| EnsemblPlantsGene:PGSC0003DMG400028633 | PGSC:PGSC0003DMG400028633 | EnsemblPlants:PGSC0003DMT400073710 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF3 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000296A63A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : |
Description
WRKYd transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400028633]
Coordinates
chr12:-:49618403..49619840
Molecular Weight (calculated)
24706.2 Da
IEP (calculated)
10.025
GRAVY (calculated)
-0.878
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSNDEAASD HLAKEVKRLS GENKKLREVL SVMYDNYNTL RKQYINNCST SGTSRKRKAE KITSRVNSEL SDEDSSCNKS RVLVHHHHIQ RSDHTTLLVK
101: DGYEWRKYGQ KITRDNPYPR AYFKCSFAPT CPVKKKVQRS VDDKSIIVAT YEGEHNHSKV VLEAGEGSST TTIGHSHKQP EFNKLLIDQM ASFLTRDPKF
201: KAALAAALRE KTTLTHK
101: DGYEWRKYGQ KITRDNPYPR AYFKCSFAPT CPVKKKVQRS VDDKSIIVAT YEGEHNHSKV VLEAGEGSST TTIGHSHKQP EFNKLLIDQM ASFLTRDPKF
201: KAALAAALRE KTTLTHK
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.