Factsheet for PGSC0003DMT400046570

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113120.2.1	Tomato	nucleus	90.86	91.03
CDX86714	Canola	nucleus	12.95	80.0
Bra025693.1-P	Field mustard	nucleus	22.86	41.81
CDY26717	Canola	nucleus	22.86	41.81
KRH63398	Soybean	nucleus	41.14	40.68
KRH56941	Soybean	nucleus	42.29	39.71
VIT_17s0000g05810.t01	Wine grape	nucleus	45.52	39.5
Zm00001d045375_P001	Maize	nucleus	18.48	38.8
Bra031053.1-P	Field mustard	nucleus	34.29	38.3
KRH54509	Soybean	nucleus	44.57	38.05
Bra016535.1-P	Field mustard	nucleus	33.9	37.55
KRH03442	Soybean	nucleus	42.48	37.17
PGSC0003DMT400017859	Potato	nucleus	30.86	36.57
TraesCS3B01G130000.1	Wheat	nucleus	33.9	36.33
CDX83804	Canola	nucleus	35.62	36.31
TraesCS3D01G113300.1	Wheat	nucleus	33.9	36.18
AT1G18860.1	Thale cress	nucleus	36.19	35.98
CDY21693	Canola	nucleus	35.43	35.84
CDX81900	Canola	nucleus	35.43	35.84
CDX96692	Canola	nucleus	35.24	35.78
Os01t0185900-01	Rice	nucleus	33.14	34.32
HORVU3Hr1G020210.2	Barley	nucleus	34.1	34.03
PGSC0003DMT400076591	Potato	nucleus	26.67	33.9
Os06t0146250-00	Rice	nucleus	38.48	33.44
Zm00001d008794_P001	Maize	nucleus	33.52	32.59
OQU75809	Sorghum	nucleus	38.29	32.16
EES02331	Sorghum	nucleus	32.76	31.39
Zm00001d039532_P001	Maize	nucleus	32.19	30.9
PGSC0003DMT400056725	Potato	nucleus	29.14	30.85
TraesCS7D01G092500.2	Wheat	nucleus	34.1	30.29
PGSC0003DMT400073710	Potato	nucleus	12.38	29.95
CDY19255	Canola	nucleus	13.52	29.83
HORVU7Hr1G021260.1	Barley	nucleus	33.9	29.23
TraesCS7D01G092600.1	Wheat	nucleus	33.33	28.93
PGSC0003DMT400019058	Potato	nucleus	14.29	28.74
PGSC0003DMT400038852	Potato	nucleus	30.29	28.55
TraesCS7D01G092400.1	Wheat	nucleus	32.76	28.43
PGSC0003DMT400042400	Potato	nucleus	29.9	28.39
TraesCS7D01G092300.1	Wheat	nucleus	32.57	28.26
PGSC0003DMT400019061	Potato	nucleus	12.76	26.48
CDX86713	Canola	nucleus	5.9	26.27
PGSC0003DMT400073396	Potato	nucleus	17.14	25.0
TraesCS7A01G096200.1	Wheat	nucleus	10.86	23.55
Bra025692.1-P	Field mustard	nucleus	10.48	22.82
CDY72612	Canola	nucleus	10.48	22.82
PGSC0003DMT400051047	Potato	nucleus	15.43	22.82

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:M1BJA0	PFAM:PF03106
EnsemblPlantsGene:PGSC0003DMG400018081	PGSC:PGSC0003DMG400018081	EnsemblPlants:PGSC0003DMT400046570	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000294CA0F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

WRKY72 [Source:PGSC_GENE;Acc:PGSC0003DMG400018081]

Coordinates

chr3:-:52941644..52945794

Molecular Weight (calculated)

58456.8 Da

IEP (calculated)

7.290

GRAVY (calculated)

-0.888

Length

525 amino acids

Sequence
(BLAST)

001: MEAVFRKSIH GGVVKQDIKI KAGEEGFVED INDLKVGKER KSVHNEEDNS KSSQQKDLPG DKEDDQLESA KADMEEVREE NQRLKKHLDR IMKDYRNLQM
101: QFHEVAQRDT EKPNNVKHDE AELVSLSLGR TSSDTKKELS KLILSKKEND EKEEDNLTLA LDCKFQSSTK SSPSNLSPEN SLGDVKDDEK GADQTWPPHK
201: VLKTMRNEEE DMVQQNPTKR AKVSVRVRCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPNCPVRK QVQRCIQDMS ILITTYEGTH NHPLPHSATS
301: MAFTTSAAAS MLLSSSSSSG SGPTTSATTT ALNYYLSDNS KPNPFYNLPN SSISQYPTIT LDLTSNSSPS SFPGQHHRTI ASSNNYHSRY NNNNNNNNLS
401: TNILNFSSFE SNHLLPMSWS NGNNQTYHKN QDIHSQSYLQ NNIKSAASAQ TLLPQDTIAA ATKAITSDPK FQSALAVALT SIIGSRGGNH HIDEKSGQNL
501: KVTEPFPVLC SFPSISPGDH KDYTL

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.