Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g068460.2.1 | Tomato | nucleus | 94.72 | 94.72 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 54.17 | 62.7 |
| KRH47344 | Soybean | nucleus | 51.11 | 59.16 |
| KRH23643 | Soybean | nucleus | 50.56 | 58.9 |
| KRH44560 | Soybean | nucleus | 50.83 | 58.47 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 30.83 | 57.81 |
| PGSC0003DMT400051047 | Potato | nucleus | 56.39 | 57.18 |
| KRH09652 | Soybean | nucleus | 49.72 | 54.24 |
| PGSC0003DMT400073710 | Potato | nucleus | 32.22 | 53.46 |
| Bra008435.1-P | Field mustard | nucleus | 41.94 | 52.07 |
| CDY22299 | Canola | nucleus | 41.94 | 52.07 |
| CDY67287 | Canola | nucleus | 41.67 | 51.72 |
| CDX79347 | Canola | nucleus | 42.22 | 51.01 |
| AT1G80840.1 | Thale cress | nucleus | 42.5 | 50.66 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 26.67 | 50.53 |
| CDX67971 | Canola | nucleus | 41.67 | 50.51 |
| Bra003588.1-P | Field mustard | nucleus | 41.67 | 50.51 |
| CDX88573 | Canola | nucleus | 42.22 | 50.5 |
| CDX87347 | Canola | nucleus | 41.67 | 50.0 |
| Bra035148.1-P | Field mustard | nucleus | 41.67 | 50.0 |
| PGSC0003DMT400019058 | Potato | nucleus | 35.56 | 49.04 |
| PGSC0003DMT400019061 | Potato | nucleus | 34.17 | 48.62 |
| GSMUA_Achr10P... | Banana | nucleus | 31.11 | 48.28 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 31.11 | 47.66 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 22.22 | 45.98 |
| GSMUA_Achr11P... | Banana | nucleus | 30.56 | 44.9 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 34.17 | 43.93 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 33.33 | 43.64 |
| GSMUA_Achr10P... | Banana | nucleus | 34.17 | 42.71 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 24.72 | 39.91 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 31.94 | 39.79 |
| Zm00001d020492_P001 | Maize | nucleus | 33.06 | 39.4 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 35.56 | 38.67 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 35.28 | 38.37 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 35.28 | 38.37 |
| Os09t0417600-02 | Rice | nucleus | 34.72 | 38.23 |
| EER98905 | Sorghum | nucleus, plastid | 34.17 | 37.61 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 34.17 | 37.27 |
| Zm00001d053746_P001 | Maize | nucleus | 32.78 | 36.76 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 34.17 | 36.72 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 35.28 | 36.29 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 32.78 | 36.09 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 31.94 | 36.05 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 34.72 | 35.92 |
| Os02t0181300-01 | Rice | nucleus | 34.72 | 35.92 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 32.78 | 35.87 |
| Os06t0649000-01 | Rice | nucleus | 33.33 | 35.61 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 32.22 | 35.58 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 26.67 | 35.42 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 34.72 | 35.41 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 31.67 | 35.19 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 31.94 | 35.17 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 31.39 | 35.09 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 26.39 | 35.06 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 31.67 | 34.97 |
| EES04642 | Sorghum | nucleus | 35.28 | 34.89 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 34.17 | 34.65 |
| Zm00001d036726_P001 | Maize | nucleus | 32.78 | 34.3 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 35.28 | 34.23 |
| EER90124 | Sorghum | nucleus | 32.5 | 34.21 |
| Zm00001d046805_P001 | Maize | nucleus | 33.33 | 34.19 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 31.11 | 34.15 |
| Zm00001d015515_P001 | Maize | nucleus | 32.78 | 34.01 |
| Zm00001d020495_P001 | Maize | nucleus | 25.0 | 33.83 |
| EER88729 | Sorghum | nucleus | 32.5 | 33.62 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 31.94 | 33.05 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 35.56 | 32.74 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 26.11 | 32.53 |
| KXG35639 | Sorghum | nucleus | 26.39 | 32.2 |
| Zm00001d005749_P001 | Maize | nucleus | 30.28 | 31.05 |
| TraesCS7D01G497300.1 | Wheat | plastid | 31.94 | 30.91 |
| Os09t0417800-01 | Rice | nucleus | 26.11 | 29.56 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 33.06 | 29.31 |
| PGSC0003DMT400056725 | Potato | nucleus | 29.44 | 21.37 |
| PGSC0003DMT400076591 | Potato | nucleus | 22.78 | 19.85 |
| PGSC0003DMT400038852 | Potato | nucleus | 30.28 | 19.57 |
| PGSC0003DMT400042400 | Potato | nucleus | 28.89 | 18.81 |
| PGSC0003DMT400017859 | Potato | nucleus | 22.5 | 18.28 |
| PGSC0003DMT400046570 | Potato | nucleus | 25.0 | 17.14 |
Protein Annotations
| EntrezGene:102580885 | MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:M1CRY8 |
| PFAM:PF03106 | EnsemblPlantsGene:PGSC0003DMG400028520 | PGSC:PGSC0003DMG400028520 | EnsemblPlants:PGSC0003DMT400073396 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF3 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000296B18B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| RefSeq:XP_006356251.1 | SEG:seg | : | : | : | : |
Description
WRKY transcription factor 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400028520]
Coordinates
chr6:+:50108072..50110187
Molecular Weight (calculated)
39796.7 Da
IEP (calculated)
8.273
GRAVY (calculated)
-0.698
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSLVDTS LDLSFRLRPV LEKVPKQEVQ SDFTGLSRER ENMGVKNEAG DLLEELNRVS SENKKLTEML TVVCENYNAL RNQMMEYMST QNGVAEDSSA
101: GSRKRKAESI SNISNPVNNN NNNMDVVHGR SSESSSSDEE SCCKKLREEH IKAKVTIVSM KTDASDTSLI VKDGYQWRKY GQKVTRDNPC PRAYFRCSFA
201: PGCPVKKKVQ RSIEDQSIVV ATYEGEHNHP QTSKPELGAS TNTSTASRLN VTTIAGTTTS VPCSTTLNSS GPTITLDLTA PKTIEKRDMK MNHSTTSPIG
301: ANSIRTTTTT GGEYQNRPEF QQFLIEQMAT SLTKDPSFKA ALAAAISGKI LQHNNQTGRW
101: GSRKRKAESI SNISNPVNNN NNNMDVVHGR SSESSSSDEE SCCKKLREEH IKAKVTIVSM KTDASDTSLI VKDGYQWRKY GQKVTRDNPC PRAYFRCSFA
201: PGCPVKKKVQ RSIEDQSIVV ATYEGEHNHP QTSKPELGAS TNTSTASRLN VTTIAGTTTS VPCSTTLNSS GPTITLDLTA PKTIEKRDMK MNHSTTSPIG
301: ANSIRTTTTT GGEYQNRPEF QQFLIEQMAT SLTKDPSFKA ALAAAISGKI LQHNNQTGRW
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.