Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G418500.2 | Wheat | nucleus | 71.43 | 88.15 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 69.95 | 86.85 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 69.7 | 86.54 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 67.73 | 86.21 |
| Os06t0649000-01 | Rice | nucleus | 52.71 | 63.5 |
| Zm00001d046805_P001 | Maize | nucleus | 52.22 | 60.4 |
| Zm00001d036726_P001 | Maize | nucleus | 50.99 | 60.17 |
| EER90124 | Sorghum | nucleus | 49.75 | 59.06 |
| EER88729 | Sorghum | nucleus | 50.25 | 58.62 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 47.54 | 54.67 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 33.0 | 47.86 |
| Bra019123.1-P | Field mustard | nucleus | 21.18 | 44.33 |
| PGSC0003DMT400073710 | Potato | nucleus | 22.41 | 41.94 |
| KRH61669 | Soybean | nucleus | 22.66 | 41.82 |
| Solyc12g042590.1.1 | Tomato | nucleus | 22.17 | 41.67 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 17.73 | 41.38 |
| Solyc08g067340.2.1 | Tomato | nucleus | 25.62 | 41.11 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 31.28 | 40.84 |
| KRH47344 | Soybean | nucleus | 31.28 | 40.84 |
| KRH15674 | Soybean | nucleus | 28.33 | 40.78 |
| CDY22299 | Canola | nucleus | 28.82 | 40.34 |
| Bra008435.1-P | Field mustard | nucleus | 28.82 | 40.34 |
| PGSC0003DMT400019061 | Potato | nucleus | 25.12 | 40.32 |
| PGSC0003DMT400019058 | Potato | nucleus | 25.86 | 40.23 |
| KRH23643 | Soybean | nucleus | 30.54 | 40.13 |
| CDY67287 | Canola | nucleus | 28.57 | 40.0 |
| Solyc08g067360.2.1 | Tomato | nucleus | 25.37 | 39.92 |
| CDX67971 | Canola | nucleus | 28.82 | 39.39 |
| Bra003588.1-P | Field mustard | nucleus | 28.82 | 39.39 |
| CDX87347 | Canola | nucleus | 29.06 | 39.33 |
| Bra035148.1-P | Field mustard | nucleus | 29.06 | 39.33 |
| KRH44560 | Soybean | nucleus | 30.3 | 39.3 |
| CDX88573 | Canola | nucleus | 29.06 | 39.2 |
| AT1G80840.1 | Thale cress | nucleus | 29.06 | 39.07 |
| CDX72327 | Canola | nucleus | 27.34 | 38.95 |
| CDX79347 | Canola | nucleus | 28.08 | 38.26 |
| CDX75196 | Canola | nucleus | 26.6 | 38.16 |
| AT2G25000.1 | Thale cress | nucleus | 25.12 | 37.64 |
| KRH09652 | Soybean | nucleus | 30.54 | 37.58 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 29.31 | 37.54 |
| Bra010220.1-P | Field mustard | nucleus | 27.59 | 36.36 |
| CDY39879 | Canola | nucleus | 27.34 | 36.16 |
| CDX68787 | Canola | nucleus | 28.08 | 35.74 |
| Bra011299.1-P | Field mustard | nucleus | 27.83 | 35.65 |
| KRH05350 | Soybean | nucleus | 27.34 | 35.58 |
| AT4G31800.1 | Thale cress | nucleus | 26.85 | 35.16 |
| PGSC0003DMT400073396 | Potato | nucleus | 29.31 | 33.06 |
| Solyc06g068460.2.1 | Tomato | nucleus | 29.06 | 32.78 |
| KRH52329 | Soybean | nucleus | 24.88 | 32.69 |
| Solyc03g116890.2.1 | Tomato | nucleus | 27.59 | 32.0 |
| CDY70096 | Canola | nucleus | 26.85 | 31.59 |
| Bra023983.1-P | Field mustard | nucleus | 26.85 | 31.59 |
| PGSC0003DMT400051047 | Potato | nucleus | 27.34 | 31.27 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 29.06 | 30.18 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 18.97 | 14.64 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 20.69 | 13.35 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 19.46 | 12.97 |
| HORVU6Hr1G079710.2 | Barley | nucleus | 18.47 | 12.1 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287XV83 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU7Hr1G113850 | EnsemblPlants:HORVU7Hr1G113850.4 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF33 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000B47C9C8 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:638275296..638276637
Molecular Weight (calculated)
43840.7 Da
IEP (calculated)
9.727
GRAVY (calculated)
-0.539
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: QDASSSSFLP NSHPRMSPPR SSIYSCPRAS SHPRPLLYQA ARTFPVFFFF FDLSHPFLSY SEFCKKDMDE QWMMGQTSLS LGLNVGRPTA RGGGPPVPSK
101: VLVEEDFMSS KKSHEVEALE AELRRVGEEN RRLGDMLRAL VVKYSDLQGK VSGMMAAAAA NNHQSLTLTT SEGGSAASPS RKRARSDSLD TAGRNPSPPL
201: AAAATGGFAI SVNVGPGRDQ AECTSVHEPC NSKRVRADEC KASRVSKLYV HADPSDLSLV MKDGYQWRKY GQKVTKDNPC PRAYFRCSFA PSCQVKKKVQ
301: RSAEDKTVLV ATYEGEHNHA QPPKLQGAGS RKSGGDAAPV RASPAPALVQ QQRNQEAPAA SVADQVADRK NLAEQMAATL TRDPGFKAAL VSALSGRILE
401: LSPSNS
101: VLVEEDFMSS KKSHEVEALE AELRRVGEEN RRLGDMLRAL VVKYSDLQGK VSGMMAAAAA NNHQSLTLTT SEGGSAASPS RKRARSDSLD TAGRNPSPPL
201: AAAATGGFAI SVNVGPGRDQ AECTSVHEPC NSKRVRADEC KASRVSKLYV HADPSDLSLV MKDGYQWRKY GQKVTKDNPC PRAYFRCSFA PSCQVKKKVQ
301: RSAEDKTVLV ATYEGEHNHA QPPKLQGAGS RKSGGDAAPV RASPAPALVQ QQRNQEAPAA SVADQVADRK NLAEQMAATL TRDPGFKAAL VSALSGRILE
401: LSPSNS
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.