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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G145600.1 Wheat nucleus 85.89 88.61
TraesCS5B01G145500.1 Wheat nucleus 85.89 88.61
TraesCS5A01G146700.1 Wheat nucleus 84.66 87.07
HORVU2Hr1G098280.1 Barley nucleus 7.06 51.11
EES09138 Sorghum nucleus 36.2 40.83
Os12t0116700-01 Rice nucleus 39.57 40.19
Os11t0117500-01 Rice nucleus 39.26 40.0
OQU78675 Sorghum nucleus 23.62 35.81
HORVU2Hr1G003310.1 Barley nucleus 7.36 32.88
AT1G66600.1 Thale cress nucleus 16.87 22.82
AT1G80590.1 Thale cress nucleus 15.64 21.7
AT1G66550.1 Thale cress nucleus 16.87 21.65
CDY04820 Canola nucleus 17.18 21.46
AT5G01900.1 Thale cress nucleus 17.18 21.29
Bra008454.1-P Field mustard nucleus 12.88 21.21
CDY37614 Canola nucleus 12.88 21.21
CDY37613 Canola nucleus 12.88 21.21
AT1G66560.1 Thale cress nucleus 15.95 20.88
CDY63078 Canola nucleus 16.26 20.54
CDY12284 Canola nucleus 15.95 20.16
CDY38684 Canola nucleus 15.95 20.16
Bra023211.1-P Field mustard nucleus 15.95 20.16
CDY71652 Canola nucleus 15.64 19.77
Bra008459.1-P Field mustard nucleus 15.64 19.77
CDY37611 Canola nucleus 15.03 19.76
Bra008456.1-P Field mustard nucleus 15.03 19.76
CDY09147 Canola nucleus 16.87 19.71
CDY26943 Canola nucleus 17.18 19.44
Bra002421.1-P Field mustard nucleus 16.87 19.1
AT5G22570.1 Thale cress nucleus 16.56 18.69
Bra020196.1-P Field mustard nucleus 16.26 18.66
CDY71866 Canola nucleus 16.26 18.66
HORVU5Hr1G046390.2 Barley nucleus, plastid 20.86 18.23
Bra020197.1-P Field mustard nucleus 15.64 18.21
Bra028918.1-P Field mustard nucleus 15.95 17.93
CDY35701 Canola nucleus 15.03 17.19
CDY35694 Canola nucleus 15.34 16.39
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80UniProt:A0A287R1U0GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0043565EnsemblPlantsGene:HORVU5Hr1G046430EnsemblPlants:HORVU5Hr1G046430.1InterPro:IPR003657InterPro:IPR036576
PFAM:PF03106PFscan:PS50811PANTHER:PTHR31282PANTHER:PTHR31282:SF17SMART:SM00774SUPFAM:SSF118290
UniParc:UPI000B46574BInterPro:WRKY_domInterPro:WRKY_dom_sfSEG:seg::
Description
No Description!
Coordinates
chrchr5H:-:361022538..361023800
Molecular Weight (calculated)
36071.5 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.555
Length
326 amino acids
Sequence
(BLAST)
001: GKFVENLREM KHIKKSSSSS RLFCDDDRSA AALREMAREQ SLVTQLRAVV LPAIQLAGGE RAEVVAQMFE SILDCSAKAI AALKLLRLDH SQVDDEVLLT
101: AMVDDKTRVR KIVPGDGGKD GDDNAKPLRR QRKRRRLGDD SVALETPVPH YDGHQWRKYG QKIINHTKHP RSYYKCTYKQ EQDCKATKTV QQQQQQQDGG
201: IEDEPVMYAV VYYGQHTCKP GQTDAAVVQT ASSGRFGEGG GEELARSNSC SNISVTCSSV VVDNHQLMTA SLESCCNLLD MAGDMATAEV NQYDQLFDVA
301: SFSPFDSGTA WAMDVSEHGL QKFGGW
Best Arabidopsis Sequence Match ( AT5G01900.1 )
(BLAST)
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Arabidopsis Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.