Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU6Hr1G038710.1 | |
HORVU7Hr1G085870.2 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G145600.1 | Wheat | nucleus | 85.89 | 88.61 |
TraesCS5B01G145500.1 | Wheat | nucleus | 85.89 | 88.61 |
TraesCS5A01G146700.1 | Wheat | nucleus | 84.66 | 87.07 |
HORVU2Hr1G098280.1 | Barley | nucleus | 7.06 | 51.11 |
EES09138 | Sorghum | nucleus | 36.2 | 40.83 |
Os12t0116700-01 | Rice | nucleus | 39.57 | 40.19 |
Os11t0117500-01 | Rice | nucleus | 39.26 | 40.0 |
OQU78675 | Sorghum | nucleus | 23.62 | 35.81 |
HORVU2Hr1G003310.1 | Barley | nucleus | 7.36 | 32.88 |
AT1G66600.1 | Thale cress | nucleus | 16.87 | 22.82 |
AT1G80590.1 | Thale cress | nucleus | 15.64 | 21.7 |
AT1G66550.1 | Thale cress | nucleus | 16.87 | 21.65 |
CDY04820 | Canola | nucleus | 17.18 | 21.46 |
AT5G01900.1 | Thale cress | nucleus | 17.18 | 21.29 |
Bra008454.1-P | Field mustard | nucleus | 12.88 | 21.21 |
CDY37614 | Canola | nucleus | 12.88 | 21.21 |
CDY37613 | Canola | nucleus | 12.88 | 21.21 |
AT1G66560.1 | Thale cress | nucleus | 15.95 | 20.88 |
CDY63078 | Canola | nucleus | 16.26 | 20.54 |
CDY12284 | Canola | nucleus | 15.95 | 20.16 |
CDY38684 | Canola | nucleus | 15.95 | 20.16 |
Bra023211.1-P | Field mustard | nucleus | 15.95 | 20.16 |
CDY71652 | Canola | nucleus | 15.64 | 19.77 |
Bra008459.1-P | Field mustard | nucleus | 15.64 | 19.77 |
CDY37611 | Canola | nucleus | 15.03 | 19.76 |
Bra008456.1-P | Field mustard | nucleus | 15.03 | 19.76 |
CDY09147 | Canola | nucleus | 16.87 | 19.71 |
CDY26943 | Canola | nucleus | 17.18 | 19.44 |
Bra002421.1-P | Field mustard | nucleus | 16.87 | 19.1 |
AT5G22570.1 | Thale cress | nucleus | 16.56 | 18.69 |
Bra020196.1-P | Field mustard | nucleus | 16.26 | 18.66 |
CDY71866 | Canola | nucleus | 16.26 | 18.66 |
HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 20.86 | 18.23 |
Bra020197.1-P | Field mustard | nucleus | 15.64 | 18.21 |
Bra028918.1-P | Field mustard | nucleus | 15.95 | 17.93 |
CDY35701 | Canola | nucleus | 15.03 | 17.19 |
CDY35694 | Canola | nucleus | 15.34 | 16.39 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287R1U0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU5Hr1G046430 | EnsemblPlants:HORVU5Hr1G046430.1 | InterPro:IPR003657 | InterPro:IPR036576 |
PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF17 | SMART:SM00774 | SUPFAM:SSF118290 |
UniParc:UPI000B46574B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:-:361022538..361023800
Molecular Weight (calculated)
36071.5 Da
IEP (calculated)
6.420
GRAVY (calculated)
-0.555
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: GKFVENLREM KHIKKSSSSS RLFCDDDRSA AALREMAREQ SLVTQLRAVV LPAIQLAGGE RAEVVAQMFE SILDCSAKAI AALKLLRLDH SQVDDEVLLT
101: AMVDDKTRVR KIVPGDGGKD GDDNAKPLRR QRKRRRLGDD SVALETPVPH YDGHQWRKYG QKIINHTKHP RSYYKCTYKQ EQDCKATKTV QQQQQQQDGG
201: IEDEPVMYAV VYYGQHTCKP GQTDAAVVQT ASSGRFGEGG GEELARSNSC SNISVTCSSV VVDNHQLMTA SLESCCNLLD MAGDMATAEV NQYDQLFDVA
301: SFSPFDSGTA WAMDVSEHGL QKFGGW
101: AMVDDKTRVR KIVPGDGGKD GDDNAKPLRR QRKRRRLGDD SVALETPVPH YDGHQWRKYG QKIINHTKHP RSYYKCTYKQ EQDCKATKTV QQQQQQQDGG
201: IEDEPVMYAV VYYGQHTCKP GQTDAAVVQT ASSGRFGEGG GEELARSNSC SNISVTCSSV VVDNHQLMTA SLESCCNLLD MAGDMATAEV NQYDQLFDVA
301: SFSPFDSGTA WAMDVSEHGL QKFGGW
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Arabidopsis Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.