Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0214900-01 | |
| Os02t0215200-02 | |
| Os06t0583400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0116700-01 | Rice | nucleus | 90.62 | 90.34 |
| EES09138 | Sorghum | nucleus | 41.25 | 45.67 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 40.94 | 41.46 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 40.62 | 41.14 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 40.31 | 40.69 |
| OQU78675 | Sorghum | nucleus | 26.56 | 39.53 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 40.0 | 39.26 |
| Os11t0117400-00 | Rice | nucleus | 24.38 | 28.78 |
| Os12t0116600-01 | Rice | nucleus | 20.0 | 27.71 |
| CDY63078 | Canola | nucleus | 18.75 | 23.26 |
| Bra020196.1-P | Field mustard | nucleus | 20.31 | 22.89 |
| CDY71866 | Canola | nucleus | 20.31 | 22.89 |
| Bra023211.1-P | Field mustard | nucleus | 18.44 | 22.87 |
| CDY12284 | Canola | nucleus | 18.44 | 22.87 |
| AT1G80590.1 | Thale cress | nucleus | 16.56 | 22.55 |
| AT1G66600.1 | Thale cress | nucleus | 16.88 | 22.41 |
| CDY04820 | Canola | nucleus | 18.12 | 22.22 |
| CDY09147 | Canola | nucleus | 19.38 | 22.22 |
| Bra008454.1-P | Field mustard | nucleus | 13.44 | 21.72 |
| CDY37613 | Canola | nucleus | 13.44 | 21.72 |
| CDY37614 | Canola | nucleus | 13.44 | 21.72 |
| Bra020197.1-P | Field mustard | nucleus | 18.75 | 21.43 |
| Bra002421.1-P | Field mustard | nucleus | 19.06 | 21.18 |
| CDY26943 | Canola | nucleus | 18.44 | 20.49 |
| CDY35701 | Canola | nucleus | 18.12 | 20.35 |
| CDY38684 | Canola | nucleus | 16.25 | 20.16 |
| Os11t0117600-00 | Rice | nucleus | 9.69 | 20.13 |
| AT1G66550.1 | Thale cress | nucleus | 15.94 | 20.08 |
| AT5G01900.1 | Thale cress | nucleus | 16.25 | 19.77 |
| CDY71652 | Canola | nucleus | 15.94 | 19.77 |
| Bra008459.1-P | Field mustard | nucleus | 15.94 | 19.77 |
| AT1G66560.1 | Thale cress | nucleus | 15.31 | 19.68 |
| AT5G22570.1 | Thale cress | nucleus | 17.5 | 19.38 |
| Bra028918.1-P | Field mustard | nucleus | 16.88 | 18.62 |
| CDY37611 | Canola | nucleus | 14.06 | 18.15 |
| Bra008456.1-P | Field mustard | nucleus | 14.06 | 18.15 |
| CDY35694 | Canola | nucleus | 17.19 | 18.03 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:9270031 | ProteinID:ABA91249.1 | ProteinID:BAH95048.1 | ProteinID:BAT12421.1 |
| ProteinID:EAZ17219.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os11g0117500 | EnsemblPlants:Os11t0117500-01 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31282 | PANTHER:PTHR31282:SF17 | UniProt:Q2RBB8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00006825B1 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_015616436.1 | SEG:seg | : | : |
Description
WRKY GENE 40DNA-binding WRKY domain containing protein. (Os11t0117500-01)
Coordinates
chr11:-:787544..789030
Molecular Weight (calculated)
35917.8 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.672
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSSNKRSL VADQWHPSSV CCDHRAALRE IAKGQSLVTQ LRAIVLPALH SDERCDLAAQ MLEGILDCSR KAVSQLQLLL SSPHDDDDHH HVDDKRRVRK
101: IISSSDDDDH CSSKAAEDDN AKPLRQHKRR RFGDSVSLET PVPHYDGHQW RKYGQKHINN SKHPRSYYRC TYRQEEKCKA TKTVQQREDL HHANSYNGDH
201: PIMYTVVYYG QHTCCKGPAA LADDHVVVEA SQISTDSHCQ SPSSSSDLQA AEVHAGNSSQ CSNISVTCSP SVVVEDCNKL LDMMPAADEL TADVLLFDMT
301: AYAPLDLDIN WEMDTNALWV
101: IISSSDDDDH CSSKAAEDDN AKPLRQHKRR RFGDSVSLET PVPHYDGHQW RKYGQKHINN SKHPRSYYRC TYRQEEKCKA TKTVQQREDL HHANSYNGDH
201: PIMYTVVYYG QHTCCKGPAA LADDHVVVEA SQISTDSHCQ SPSSSSDLQA AEVHAGNSSQ CSNISVTCSP SVVVEDCNKL LDMMPAADEL TADVLLFDMT
301: AYAPLDLDIN WEMDTNALWV
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.