Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G66560.1 | Thale cress | nucleus | 60.58 | 58.63 |
| AT1G80590.1 | Thale cress | nucleus | 40.66 | 41.7 |
| CDY71652 | Canola | nucleus | 42.32 | 39.53 |
| Bra008459.1-P | Field mustard | nucleus | 42.32 | 39.53 |
| AT1G66550.1 | Thale cress | nucleus | 41.49 | 39.37 |
| CDY37614 | Canola | nucleus | 31.95 | 38.89 |
| CDY37613 | Canola | nucleus | 31.95 | 38.89 |
| Bra008454.1-P | Field mustard | nucleus | 31.95 | 38.89 |
| CDY37611 | Canola | nucleus | 36.93 | 35.89 |
| Bra008456.1-P | Field mustard | nucleus | 36.51 | 35.48 |
| CDY38684 | Canola | nucleus | 37.34 | 34.88 |
| HORVU2Hr1G098280.1 | Barley | nucleus | 5.39 | 28.89 |
| AT5G01900.1 | Thale cress | nucleus | 30.71 | 28.14 |
| AT5G22570.1 | Thale cress | nucleus | 33.2 | 27.68 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 7.47 | 24.66 |
| OQU78675 | Sorghum | nucleus | 20.75 | 23.26 |
| Os12t0116600-01 | Rice | nucleus | 19.09 | 19.91 |
| EES09138 | Sorghum | nucleus | 23.65 | 19.72 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 21.16 | 19.03 |
| Os11t0117400-00 | Rice | nucleus | 21.16 | 18.82 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 20.33 | 18.63 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 24.48 | 18.61 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 24.07 | 18.35 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 23.65 | 18.04 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 18.26 | 17.81 |
| Os12t0116700-01 | Rice | nucleus | 23.65 | 17.76 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 18.67 | 17.72 |
| EES09137 | Sorghum | nucleus | 19.92 | 17.71 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 18.26 | 17.53 |
| OQU78673 | Sorghum | nucleus | 17.01 | 17.45 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 19.09 | 17.42 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 9.54 | 16.91 |
| EES09141 | Sorghum | nucleus | 19.09 | 16.91 |
| Os11t0117500-01 | Rice | nucleus | 22.41 | 16.88 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 22.82 | 16.87 |
| EES16607 | Sorghum | nucleus | 18.67 | 16.85 |
| Zm00001d023336_P001 | Maize | nucleus | 19.92 | 16.78 |
| Zm00001d044682_P001 | Maize | plastid | 16.18 | 15.35 |
| Zm00001d052358_P001 | Maize | nucleus | 18.67 | 14.75 |
| Zm00001d005056_P001 | Maize | nucleus | 18.26 | 14.62 |
| Os11t0117600-00 | Rice | nucleus | 9.13 | 14.29 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 19.09 | 13.65 |
| TraesCS5A01G146500.1 | Wheat | nucleus | 19.09 | 13.61 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 18.67 | 13.47 |
| Zm00001d023332_P001 | Maize | nucleus | 17.01 | 12.65 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 9.96 | 12.44 |
| EES15637 | Sorghum | nucleus | 17.43 | 12.32 |
| Zm00001d044680_P001 | Maize | nucleus | 18.26 | 12.19 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 17.43 | 11.26 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:842978 | UniProt:A0A178WCU4 | ProteinID:AAG51176.1 | EMBL:AB493522 |
| ProteinID:AEE34534.1 | EMBL:AF452172 | ArrayExpress:AT1G66600 | EnsemblPlantsGene:AT1G66600 | RefSeq:AT1G66600 | TAIR:AT1G66600 |
| RefSeq:AT1G66600-TAIR-G | EnsemblPlants:AT1G66600.1 | TAIR:AT1G66600.1 | UniProt:C0SV19 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_176833.1 | ProteinID:OAP16260.1 |
| PFAM:PF03106 | PO:PO:0000003 | PO:PO:0000293 | PO:PO:0007131 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009046 | PO:PO:0009047 | PFscan:PS50811 | PANTHER:PTHR32096 | PANTHER:PTHR32096:SF36 | UniProt:Q9C6H5 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000A9761 | Symbol:WRKY63 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
WRKY63Probable WRKY transcription factor 63 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6H5]
Coordinates
chr1:+:24848320..24849543
Molecular Weight (calculated)
27380.3 Da
IEP (calculated)
5.884
GRAVY (calculated)
-0.456
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSNIDHKAV AALLHGQGCA NILKTVLDNC KVSSVSTEPL INTILDSFSL ALSSVNSPNR QPHHESSSRD MAGLVPQRSS KKKICGVKGL EIYRDDSPNP
101: RLDDGFTWRK YGQKTIKTSL YQRCYYRCAY AKDQNCYATK RVQMIQDSPP VYRTTYLGQH TCKAFGVHDN TYGSEMINFD QVVSESVMRQ LATIGEQAVL
201: MEDEANHIMN QEYDINDYLV DDEVFWGNEF PLFSSEDLML F
101: RLDDGFTWRK YGQKTIKTSL YQRCYYRCAY AKDQNCYATK RVQMIQDSPP VYRTTYLGQH TCKAFGVHDN TYGSEMINFD QVVSESVMRQ LATIGEQAVL
201: MEDEANHIMN QEYDINDYLV DDEVFWGNEF PLFSSEDLML F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.