Factsheet for Zm00001d023332_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014076_P001
Zm00001d016381_P001
Zm00001d018346_P001
Zm00001d039202_P001
Zm00001d046388_P001
Zm00001d053595_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01900.1	Zm00001d014076_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d016381_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d018346_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d039202_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d046388_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d053595_P004	AT4G38130.1	18776063
AT5G22570.1	Zm00001d014076_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d016381_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d018346_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d039202_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d046388_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d053595_P004	AT4G38130.1	18776063

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15637	Sorghum	nucleus	41.05	39.0
Zm00001d044680_P001	Maize	nucleus	37.04	33.24
Os11t0117600-00	Rice	nucleus	15.12	31.82
TraesCS5B01G145300.1	Wheat	nucleus	33.02	31.75
TraesCS5D01G145800.1	Wheat	nucleus	32.41	31.44
TraesCS5A01G146500.1	Wheat	nucleus	32.41	31.07
HORVU5Hr1G046390.2	Barley	nucleus, plastid	31.48	27.35
CDY12284	Canola	nucleus	15.12	18.99
CDY63078	Canola	nucleus	15.12	18.99
Bra023211.1-P	Field mustard	nucleus	15.12	18.99
Zm00001d005056_P001	Maize	nucleus	17.59	18.94
Zm00001d044682_P001	Maize	plastid	14.81	18.9
AT5G01900.1	Thale cress	nucleus	15.12	18.63
CDY04820	Canola	nucleus	14.81	18.39
AT1G80590.1	Thale cress	nucleus	12.96	17.87
Zm00001d023336_P001	Maize	nucleus	15.74	17.83
CDY37613	Canola	nucleus	10.8	17.68
CDY37614	Canola	nucleus	10.8	17.68
Bra008454.1-P	Field mustard	nucleus	10.8	17.68
Zm00001d052358_P001	Maize	nucleus	16.05	17.05
AT1G66600.1	Thale cress	nucleus	12.65	17.01
Bra028918.1-P	Field mustard	nucleus	15.12	16.9
CDY26943	Canola	nucleus	14.51	16.32
Bra020196.1-P	Field mustard	nucleus	14.2	16.2
CDY71866	Canola	nucleus	14.2	16.2
CDY38684	Canola	nucleus	12.35	15.5
AT1G66560.1	Thale cress	nucleus	11.73	15.26
AT5G22570.1	Thale cress	nucleus	13.58	15.22
CDY71652	Canola	nucleus	12.04	15.12
Bra008459.1-P	Field mustard	nucleus	12.04	15.12
AT1G66550.1	Thale cress	nucleus	11.73	14.96
Bra002421.1-P	Field mustard	nucleus	13.27	14.93
CDY09147	Canola	nucleus	12.65	14.7
CDY37611	Canola	nucleus	11.11	14.52
Bra008456.1-P	Field mustard	nucleus	11.11	14.52
CDY35701	Canola	nucleus	12.65	14.39
CDY35694	Canola	nucleus	12.96	13.77
Bra020197.1-P	Field mustard	nucleus	11.73	13.57

Protein Annotations

EntrezGene:100383957	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK39122.1	EMBL:BT068720	UniProt:C0PKA1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF36	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000195CD8F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d023332	EnsemblPlants:Zm00001d023332_P001
EnsemblPlants:Zm00001d023332_T001	SEG:seg	:	:	:	:

Description

WRKY-transcription factor 63Probable WRKY transcription factor 38

Coordinates

chr10:+:3599571..3601619

Molecular Weight (calculated)

34393.3 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.397

Length

324 amino acids

Sequence
(BLAST)

001: MALVLGREEE LLAQLRALLT FLPPPASPPA PAAPVKVESI MGTSGGGRRL GSKRDRDDDS EAEAEQHGDE PAAAQPHYCP HPPPPCKRTR RRKNKKKRQQ
101: SKCLVTTVPD FDGYQWRKYG QKQIEGAMYP RSYYRCIQSA KQGCQAKRTV QRNDDDGATA PPEYTVVYVA EHTCTANDDA LEAPPVILET TTSVVVRAPA
201: AHTDPVVVVV PATATTSAAA AASACSTTVT TGTESPAISG DDVACCWSSS GSSSSGYSYA DDSCCCCCCD GLLAAVVHGG CGGSWAPGPA DSVSVPSFRL
301: QEMEDLTGPI RSPVHVVPRA WLDR

Best Arabidopsis Sequence Match ( AT2G40750.1 )
(BLAST)

001: MDSNSNNTKS IKRKVVDQLV EGYEFATQLQ LLLSHQHSNQ YHIDETRLVS GSGSVSGGPD PVDELMSKIL GSFHKTISVL DSFDPVAVSV PIAVEGSWNA
101: SCGDDSATPV SCNGGDSGES KKKRLGVGKG KRGCYTRKTR SHTRIVEAKS SEDRYAWRKY GQKEILNTTF PRSYFRCTHK PTQGCKATKQ VQKQDQDSEM
201: FQITYIGYHT CTANDQTHAK TEPFDQEIIM DSEKTLAAST AQNHVNAMVQ EQENNTSSVT AIDAGMVKEE QNNNGDQSKD YYEGSSTGED LSLVWQETMM
301: FDDHQNHYYC GETSTTSHQF GFIDNDDQFS SFFDSYCADY ERTSAM

Arabidopsis Description

WRKY54Probable WRKY transcription factor 54 [Source:UniProtKB/Swiss-Prot;Acc:Q93WU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.