Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G22570.1 | CDY21119 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | CDY30008 | AT4G38130.1 | 18776063 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020197.1-P | Field mustard | nucleus | 92.83 | 92.5 |
| CDY35701 | Canola | nucleus | 72.4 | 70.88 |
| CDY71866 | Canola | nucleus | 67.03 | 65.85 |
| CDY26943 | Canola | nucleus | 50.18 | 48.61 |
| CDY35694 | Canola | nucleus | 51.97 | 47.54 |
| AT5G22570.1 | Thale cress | nucleus | 48.39 | 46.71 |
| HORVU2Hr1G098280.1 | Barley | nucleus | 6.09 | 37.78 |
| CDY04820 | Canola | nucleus | 28.67 | 30.65 |
| CDY63078 | Canola | nucleus | 26.88 | 29.07 |
| CDY12284 | Canola | nucleus | 26.52 | 28.68 |
| CDY37613 | Canola | nucleus | 20.07 | 28.28 |
| CDY37614 | Canola | nucleus | 20.07 | 28.28 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 7.17 | 27.4 |
| CDY71652 | Canola | nucleus | 25.09 | 27.13 |
| CDY38684 | Canola | nucleus | 24.73 | 26.74 |
| CDY37611 | Canola | nucleus | 22.58 | 25.4 |
| OQU78675 | Sorghum | nucleus | 15.77 | 20.47 |
| Os12t0116700-01 | Rice | nucleus | 22.58 | 19.63 |
| Os11t0117500-01 | Rice | nucleus | 22.22 | 19.38 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 9.32 | 19.12 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 16.85 | 18.5 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 16.13 | 18.22 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 20.07 | 17.72 |
| Zm00001d044682_P001 | Maize | plastid | 16.13 | 17.72 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 16.85 | 17.54 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 16.49 | 17.42 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 19.71 | 17.35 |
| EES09138 | Sorghum | nucleus | 17.92 | 17.3 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 19.35 | 17.09 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 19.71 | 16.87 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 15.05 | 16.73 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 15.77 | 16.73 |
| OQU78673 | Sorghum | nucleus | 13.98 | 16.6 |
| Os12t0116600-01 | Rice | nucleus | 13.26 | 16.02 |
| Zm00001d005056_P001 | Maize | nucleus | 17.2 | 15.95 |
| EES09137 | Sorghum | nucleus | 15.41 | 15.87 |
| Zm00001d023336_P001 | Maize | nucleus | 16.13 | 15.73 |
| Os11t0117400-00 | Rice | nucleus | 15.05 | 15.5 |
| EES09141 | Sorghum | nucleus | 15.05 | 15.44 |
| Zm00001d052358_P001 | Maize | nucleus | 16.13 | 14.75 |
| EES16607 | Sorghum | nucleus | 13.98 | 14.61 |
| TraesCS5A01G146500.1 | Wheat | nucleus | 15.41 | 12.72 |
| Zm00001d023332_P001 | Maize | nucleus | 14.7 | 12.65 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 14.34 | 11.87 |
| EES15637 | Sorghum | nucleus | 14.34 | 11.73 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 13.98 | 11.68 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 7.53 | 10.88 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 13.98 | 10.46 |
| Zm00001d044680_P001 | Maize | nucleus | 12.9 | 9.97 |
| Os11t0117600-00 | Rice | nucleus | 5.38 | 9.74 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078F7S8 | UniProt:A0A078F7S8 | EnsemblPlants:CDY09147 | ProteinID:CDY09147 |
| ProteinID:CDY09147.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00001377001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF37 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEC218 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g05730DBnaA02g05730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7S8]
Coordinates
chrLK031993:-:344908..346129
Molecular Weight (calculated)
31991.5 Da
IEP (calculated)
6.793
GRAVY (calculated)
-1.158
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTSTLNSM NTSHEKAVQA ILYGQSCAKR LKLQLDHPMA DGRSDNFFSD LSSRDSSSSS SPPLPQRSHS KKRKNNNTNS SENWRHDSPD PNYYDGFLWR
101: KYGQKTIKQS KHQRSYYRCS YNIDHACGAR KHEQKIKDNP PVYRTTYFGH HTCNINHNQD AGLTTVGDSV NDLENSRMIW FGEDLDQEKE SHTSGLSVSV
201: KHEEGSIKEE TVDQYRHRGI TSHDKDCQNV IKENHQPSPS GSYTPPSSSG SEIDMFDSDL LVEDLDLWDR YDMYDFGLR
101: KYGQKTIKQS KHQRSYYRCS YNIDHACGAR KHEQKIKDNP PVYRTTYFGH HTCNINHNQD AGLTTVGDSV NDLENSRMIW FGEDLDQEKE SHTSGLSVSV
201: KHEEGSIKEE TVDQYRHRGI TSHDKDCQNV IKENHQPSPS GSYTPPSSSG SEIDMFDSDL LVEDLDLWDR YDMYDFGLR
001: MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES FSNAISILSA KPETEDDQFS DLSSRDSSPP PQGSPSKKRK IDSTNSSENW
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
Arabidopsis Description
WRKY38Probable WRKY transcription factor 38 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWF1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.