Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G01900.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G01900.1 | KXG20269 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | KXG20269 | AT4G38130.1 | 18776063 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES09138 | Sorghum | nucleus | 53.02 | 39.45 |
| Os11t0117500-01 | Rice | nucleus | 39.53 | 26.56 |
| Os12t0116700-01 | Rice | nucleus | 39.53 | 26.48 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 36.74 | 25.0 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 36.28 | 24.68 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 36.28 | 24.61 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 35.81 | 23.62 |
| EES09141 | Sorghum | nucleus | 27.91 | 22.06 |
| Bra008454.1-P | Field mustard | nucleus | 20.0 | 21.72 |
| CDY37614 | Canola | nucleus | 20.0 | 21.72 |
| CDY37613 | Canola | nucleus | 20.0 | 21.72 |
| AT1G66600.1 | Thale cress | nucleus | 23.26 | 20.75 |
| EES16607 | Sorghum | nucleus | 25.12 | 20.22 |
| AT1G80590.1 | Thale cress | nucleus | 21.4 | 19.57 |
| EES09137 | Sorghum | nucleus | 24.19 | 19.19 |
| AT1G66560.1 | Thale cress | nucleus | 21.86 | 18.88 |
| OQU78673 | Sorghum | nucleus | 20.47 | 18.72 |
| Bra002421.1-P | Field mustard | nucleus | 24.19 | 18.06 |
| CDY12284 | Canola | nucleus | 21.4 | 17.83 |
| CDY71866 | Canola | nucleus | 23.26 | 17.61 |
| Bra020196.1-P | Field mustard | nucleus | 23.26 | 17.61 |
| CDY38684 | Canola | nucleus | 20.93 | 17.44 |
| CDY63078 | Canola | nucleus | 20.93 | 17.44 |
| CDY71652 | Canola | nucleus | 20.93 | 17.44 |
| Bra023211.1-P | Field mustard | nucleus | 20.93 | 17.44 |
| CDY04820 | Canola | nucleus | 20.93 | 17.24 |
| Bra008459.1-P | Field mustard | nucleus | 20.47 | 17.05 |
| CDY26943 | Canola | nucleus | 22.79 | 17.01 |
| AT1G66550.1 | Thale cress | nucleus | 20.0 | 16.93 |
| AT5G01900.1 | Thale cress | nucleus | 20.47 | 16.73 |
| Bra020197.1-P | Field mustard | nucleus | 20.93 | 16.07 |
| AT5G22570.1 | Thale cress | nucleus | 21.4 | 15.92 |
| CDY09147 | Canola | nucleus | 20.47 | 15.77 |
| Bra028918.1-P | Field mustard | nucleus | 20.47 | 15.17 |
| EES15637 | Sorghum | nucleus | 23.72 | 14.96 |
| CDY35701 | Canola | nucleus | 19.53 | 14.74 |
| CDY37611 | Canola | nucleus | 16.74 | 14.52 |
| Bra008456.1-P | Field mustard | nucleus | 16.74 | 14.52 |
| CDY35694 | Canola | nucleus | 19.53 | 13.77 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1Z5R5F6 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:OQU78675 | ProteinID:OQU78675 |
| ProteinID:OQU78675.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF17 | SMART:SM00774 |
| EnsemblPlantsGene:SORBI_3008G029000 | SUPFAM:SSF118290 | UniParc:UPI000B8B960D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:2604929..2606770
Molecular Weight (calculated)
24677.6 Da
IEP (calculated)
6.601
GRAVY (calculated)
-1.080
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELQRHHQS DDGARARPDD VLVDDKKRVK RSISDDCISK EEDVVKPRHK QLKRGRFDES MSLETPVPHY DGRQWRKYGQ KHINKSKHPR NYYRCAYRQE
101: QGCKATKTVQ QQDDSTGTDH PVMFTVVYHD QHTCKDNNGI NLGIDDSETN SQSSISTIST DPYGRETPSL DGNKLLDKSA DLITRNSMYE PADMTVFEPL
201: DLDSWALDAF LRFGA
101: QGCKATKTVQ QQDDSTGTDH PVMFTVVYHD QHTCKDNNGI NLGIDDSETN SQSSISTIST DPYGRETPSL DGNKLLDKSA DLITRNSMYE PADMTVFEPL
201: DLDSWALDAF LRFGA
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.