Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63078 | Canola | nucleus | 64.26 | 65.5 |
| CDY12284 | Canola | nucleus | 63.88 | 65.12 |
| Bra023211.1-P | Field mustard | nucleus | 63.5 | 64.73 |
| CDY04820 | Canola | nucleus | 63.5 | 63.98 |
| Bra028918.1-P | Field mustard | nucleus | 63.12 | 57.24 |
| AT1G66560.1 | Thale cress | nucleus | 29.66 | 31.33 |
| HORVU2Hr1G098280.1 | Barley | nucleus | 5.32 | 31.11 |
| AT1G66550.1 | Thale cress | nucleus | 29.66 | 30.71 |
| AT1G66600.1 | Thale cress | nucleus | 28.14 | 30.71 |
| AT1G80590.1 | Thale cress | nucleus | 26.62 | 29.79 |
| AT5G22570.1 | Thale cress | nucleus | 30.04 | 27.34 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 6.08 | 21.92 |
| OQU78675 | Sorghum | nucleus | 16.73 | 20.47 |
| EES16607 | Sorghum | nucleus | 19.01 | 18.73 |
| EES09137 | Sorghum | nucleus | 19.01 | 18.45 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 18.25 | 18.18 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 17.11 | 17.93 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 9.13 | 17.65 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 17.87 | 17.54 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 17.49 | 17.49 |
| Zm00001d023336_P001 | Maize | nucleus | 19.01 | 17.48 |
| Zm00001d052358_P001 | Maize | nucleus | 20.15 | 17.38 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 16.73 | 17.32 |
| Os12t0116600-01 | Rice | nucleus | 15.21 | 17.32 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 21.29 | 17.18 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 20.53 | 17.09 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 20.53 | 17.09 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 20.53 | 17.03 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 15.97 | 17.0 |
| Zm00001d044682_P001 | Maize | plastid | 16.35 | 16.93 |
| EES09141 | Sorghum | nucleus | 17.11 | 16.54 |
| Os12t0116700-01 | Rice | nucleus | 20.15 | 16.51 |
| Zm00001d005056_P001 | Maize | nucleus | 18.63 | 16.28 |
| Os11t0117500-01 | Rice | nucleus | 19.77 | 16.25 |
| OQU78673 | Sorghum | nucleus | 14.45 | 16.17 |
| EES09138 | Sorghum | nucleus | 17.49 | 15.92 |
| Os11t0117400-00 | Rice | nucleus | 16.35 | 15.87 |
| Zm00001d023332_P001 | Maize | nucleus | 18.63 | 15.12 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 18.25 | 14.37 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 18.25 | 14.24 |
| TraesCS5A01G146500.1 | Wheat | nucleus | 18.25 | 14.2 |
| Os11t0117600-00 | Rice | nucleus | 7.98 | 13.64 |
| EES15637 | Sorghum | nucleus | 17.49 | 13.49 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 17.87 | 12.6 |
| Zm00001d044680_P001 | Maize | nucleus | 17.11 | 12.47 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 6.46 | 8.81 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:831826 | UniProt:A0A178U8T9 | EMBL:AB493730 | ProteinID:AED90407.1 |
| EMBL:AF224700 | ArrayExpress:AT5G01900 | EnsemblPlantsGene:AT5G01900 | RefSeq:AT5G01900 | TAIR:AT5G01900 | RefSeq:AT5G01900-TAIR-G |
| EnsemblPlants:AT5G01900.1 | TAIR:AT5G01900.1 | UniProt:C0SVM7 | ProteinID:CAB82760.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009863 | GO:GO:0009987 | GO:GO:0042742 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_195810.2 | ProteinID:OAO90266.1 | PFAM:PF03106 | PO:PO:0000293 |
| PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF37 | UniProt:Q9LZV6 | SMART:SM00774 | SUPFAM:SSF118290 |
| UniParc:UPI000018DBC6 | Symbol:WRKY62 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
Coordinates
chr5:-:350925..352095
Molecular Weight (calculated)
30444.0 Da
IEP (calculated)
6.357
GRAVY (calculated)
-0.963
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.