Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT1G66600.1 | Thale cress | nucleus | 41.7 | 40.66 |
AT1G66560.1 | Thale cress | nucleus | 41.28 | 38.96 |
AT1G66550.1 | Thale cress | nucleus | 39.15 | 36.22 |
CDY38684 | Canola | nucleus | 38.3 | 34.88 |
Bra008459.1-P | Field mustard | nucleus | 37.87 | 34.5 |
CDY71652 | Canola | nucleus | 37.87 | 34.5 |
HORVU2Hr1G098280.1 | Barley | nucleus | 6.38 | 33.33 |
Bra008456.1-P | Field mustard | nucleus | 33.62 | 31.85 |
CDY37611 | Canola | nucleus | 33.19 | 31.45 |
Bra008454.1-P | Field mustard | nucleus | 23.4 | 27.78 |
CDY37613 | Canola | nucleus | 23.4 | 27.78 |
CDY37614 | Canola | nucleus | 23.4 | 27.78 |
AT5G01900.1 | Thale cress | nucleus | 29.79 | 26.62 |
HORVU2Hr1G003310.1 | Barley | nucleus | 8.09 | 26.03 |
AT5G22570.1 | Thale cress | nucleus | 28.94 | 23.53 |
OQU78675 | Sorghum | nucleus | 19.57 | 21.4 |
Os12t0116600-01 | Rice | nucleus | 20.43 | 20.78 |
EES16607 | Sorghum | nucleus | 21.28 | 18.73 |
TraesCS5A01G146600.1 | Wheat | nucleus | 21.28 | 18.66 |
TraesCS5B01G145400.1 | Wheat | nucleus | 20.85 | 18.63 |
EES09137 | Sorghum | nucleus | 21.28 | 18.45 |
TraesCS5D01G145700.1 | Wheat | nucleus | 20.43 | 18.18 |
Os11t0117400-00 | Rice | nucleus | 20.85 | 18.08 |
EES09138 | Sorghum | nucleus | 22.13 | 17.99 |
Zm00001d044682_P001 | Maize | plastid | 19.15 | 17.72 |
Zm00001d023336_P001 | Maize | nucleus | 21.28 | 17.48 |
TraesCS2A01G019300.1 | Wheat | nucleus | 18.3 | 17.13 |
OQU78673 | Sorghum | nucleus | 17.02 | 17.02 |
TraesCS2D01G051000.1 | Wheat | nucleus | 17.87 | 17.0 |
TraesCS2A01G052100.1 | Wheat | nucleus | 18.3 | 16.93 |
TraesCS2A01G021400.1 | Wheat | nucleus | 9.79 | 16.91 |
Os12t0116700-01 | Rice | nucleus | 22.98 | 16.82 |
Os11t0117500-01 | Rice | nucleus | 22.55 | 16.56 |
TraesCS5D01G145600.1 | Wheat | nucleus | 21.7 | 16.14 |
Zm00001d005056_P001 | Maize | nucleus | 20.43 | 15.95 |
TraesCS5B01G145500.1 | Wheat | nucleus | 21.28 | 15.82 |
HORVU5Hr1G046430.1 | Barley | nucleus | 21.7 | 15.64 |
TraesCS5A01G146700.1 | Wheat | nucleus | 20.85 | 15.46 |
EES09141 | Sorghum | nucleus | 17.87 | 15.44 |
Zm00001d052358_P001 | Maize | nucleus | 18.3 | 14.1 |
TraesCS5A01G146500.1 | Wheat | nucleus | 20.0 | 13.91 |
TraesCS5D01G145800.1 | Wheat | nucleus | 19.57 | 13.77 |
TraesCS5B01G145300.1 | Wheat | nucleus | 19.15 | 13.35 |
Zm00001d023332_P001 | Maize | nucleus | 17.87 | 12.96 |
Os11t0117600-00 | Rice | nucleus | 8.09 | 12.34 |
HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 17.45 | 10.99 |
EES15637 | Sorghum | nucleus | 15.32 | 10.56 |
Zm00001d044680_P001 | Maize | nucleus | 15.74 | 10.25 |
TraesCS2D01G051500.1 | Wheat | cytosol | 8.09 | 9.84 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:844398 | ProteinID:AAF27132.1 | EMBL:AB493541 | ProteinID:AEE36425.1 |
ArrayExpress:AT1G80590 | EnsemblPlantsGene:AT1G80590 | RefSeq:AT1G80590 | TAIR:AT1G80590 | RefSeq:AT1G80590-TAIR-G | EnsemblPlants:AT1G80590.1 |
TAIR:AT1G80590.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_178174.1 | PFAM:PF03106 | PO:PO:0000013 | PO:PO:0007098 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 |
PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR32096 |
PANTHER:PTHR32096:SF36 | UniProt:Q9M8M6 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000009D760 | Symbol:WRKY66 |
InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : | : |
Description
WRKY66Probable WRKY transcription factor 66 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M6]
Coordinates
chr1:-:30296166..30297224
Molecular Weight (calculated)
26404.2 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.535
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLEIDAKAV SALLLGQGCA NNLKTLLKNH ETGSVSTEPL INSILDSFSF ALSSQNIPRH VSQRSSKKKM CGIQGMEDSP TPAHIDGFIW RKYGQKTIKT
101: SPHQRWYYRC AYAKDQNCDA TKRVQKIQDN PPVYRNTYVG QHACEAPAYA VNNGGTYGSK MIKFDYVIPE SVMPQPLSID SQEITMEDKD TDDHILNYIN
201: EHLMEDEAYD VFPDVLGERC CFGLEPFPGL NINKS
101: SPHQRWYYRC AYAKDQNCDA TKRVQKIQDN PPVYRNTYVG QHACEAPAYA VNNGGTYGSK MIKFDYVIPE SVMPQPLSID SQEITMEDKD TDDHILNYIN
201: EHLMEDEAYD VFPDVLGERC CFGLEPFPGL NINKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.