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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • cytosol 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G66600.1 Thale cress nucleus 41.7 40.66
AT1G66560.1 Thale cress nucleus 41.28 38.96
AT1G66550.1 Thale cress nucleus 39.15 36.22
CDY38684 Canola nucleus 38.3 34.88
Bra008459.1-P Field mustard nucleus 37.87 34.5
CDY71652 Canola nucleus 37.87 34.5
HORVU2Hr1G098280.1 Barley nucleus 6.38 33.33
Bra008456.1-P Field mustard nucleus 33.62 31.85
CDY37611 Canola nucleus 33.19 31.45
Bra008454.1-P Field mustard nucleus 23.4 27.78
CDY37613 Canola nucleus 23.4 27.78
CDY37614 Canola nucleus 23.4 27.78
AT5G01900.1 Thale cress nucleus 29.79 26.62
HORVU2Hr1G003310.1 Barley nucleus 8.09 26.03
AT5G22570.1 Thale cress nucleus 28.94 23.53
OQU78675 Sorghum nucleus 19.57 21.4
Os12t0116600-01 Rice nucleus 20.43 20.78
EES16607 Sorghum nucleus 21.28 18.73
TraesCS5A01G146600.1 Wheat nucleus 21.28 18.66
TraesCS5B01G145400.1 Wheat nucleus 20.85 18.63
EES09137 Sorghum nucleus 21.28 18.45
TraesCS5D01G145700.1 Wheat nucleus 20.43 18.18
Os11t0117400-00 Rice nucleus 20.85 18.08
EES09138 Sorghum nucleus 22.13 17.99
Zm00001d044682_P001 Maize plastid 19.15 17.72
Zm00001d023336_P001 Maize nucleus 21.28 17.48
TraesCS2A01G019300.1 Wheat nucleus 18.3 17.13
OQU78673 Sorghum nucleus 17.02 17.02
TraesCS2D01G051000.1 Wheat nucleus 17.87 17.0
TraesCS2A01G052100.1 Wheat nucleus 18.3 16.93
TraesCS2A01G021400.1 Wheat nucleus 9.79 16.91
Os12t0116700-01 Rice nucleus 22.98 16.82
Os11t0117500-01 Rice nucleus 22.55 16.56
TraesCS5D01G145600.1 Wheat nucleus 21.7 16.14
Zm00001d005056_P001 Maize nucleus 20.43 15.95
TraesCS5B01G145500.1 Wheat nucleus 21.28 15.82
HORVU5Hr1G046430.1 Barley nucleus 21.7 15.64
TraesCS5A01G146700.1 Wheat nucleus 20.85 15.46
EES09141 Sorghum nucleus 17.87 15.44
Zm00001d052358_P001 Maize nucleus 18.3 14.1
TraesCS5A01G146500.1 Wheat nucleus 20.0 13.91
TraesCS5D01G145800.1 Wheat nucleus 19.57 13.77
TraesCS5B01G145300.1 Wheat nucleus 19.15 13.35
Zm00001d023332_P001 Maize nucleus 17.87 12.96
Os11t0117600-00 Rice nucleus 8.09 12.34
HORVU5Hr1G046390.2 Barley nucleus, plastid 17.45 10.99
EES15637 Sorghum nucleus 15.32 10.56
Zm00001d044680_P001 Maize nucleus 15.74 10.25
TraesCS2D01G051500.1 Wheat cytosol 8.09 9.84
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80EntrezGene:844398ProteinID:AAF27132.1EMBL:AB493541ProteinID:AEE36425.1
ArrayExpress:AT1G80590EnsemblPlantsGene:AT1G80590RefSeq:AT1G80590TAIR:AT1G80590RefSeq:AT1G80590-TAIR-GEnsemblPlants:AT1G80590.1
TAIR:AT1G80590.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
InterPro:IPR003657InterPro:IPR036576RefSeq:NP_178174.1PFAM:PF03106PO:PO:0000013PO:PO:0007098
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009025PO:PO:0009029
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0025281PFscan:PS50811PANTHER:PTHR32096
PANTHER:PTHR32096:SF36UniProt:Q9M8M6SMART:SM00774SUPFAM:SSF118290UniParc:UPI000009D760Symbol:WRKY66
InterPro:WRKY_domInterPro:WRKY_dom_sf::::
Description
WRKY66Probable WRKY transcription factor 66 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8M6]
Coordinates
chr1:-:30296166..30297224
Molecular Weight (calculated)
26404.2 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.535
Length
235 amino acids
Sequence
(BLAST)
001: MSLEIDAKAV SALLLGQGCA NNLKTLLKNH ETGSVSTEPL INSILDSFSF ALSSQNIPRH VSQRSSKKKM CGIQGMEDSP TPAHIDGFIW RKYGQKTIKT
101: SPHQRWYYRC AYAKDQNCDA TKRVQKIQDN PPVYRNTYVG QHACEAPAYA VNNGGTYGSK MIKFDYVIPE SVMPQPLSID SQEITMEDKD TDDHILNYIN
201: EHLMEDEAYD VFPDVLGERC CFGLEPFPGL NINKS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.