Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G01900.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G01900.1 | KXG20269 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | KXG20269 | AT4G38130.1 | 18776063 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G098280.1 | Barley | nucleus | 12.13 | 73.33 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 13.24 | 49.32 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 23.53 | 47.06 |
| Zm00001d005056_P001 | Maize | nucleus | 51.84 | 46.84 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 45.22 | 46.77 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 40.44 | 44.53 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 40.44 | 43.31 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 38.24 | 41.43 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 40.81 | 41.42 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 39.71 | 40.91 |
| OQU78675 | Sorghum | nucleus | 22.06 | 27.91 |
| EES09138 | Sorghum | nucleus | 29.41 | 27.68 |
| EES09137 | Sorghum | nucleus | 22.06 | 22.14 |
| EES16607 | Sorghum | nucleus | 21.32 | 21.72 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 14.71 | 20.73 |
| CDY37614 | Canola | nucleus | 14.71 | 20.2 |
| CDY37613 | Canola | nucleus | 14.71 | 20.2 |
| Bra008454.1-P | Field mustard | nucleus | 14.71 | 20.2 |
| EES15637 | Sorghum | nucleus | 25.0 | 19.94 |
| CDY04820 | Canola | nucleus | 18.38 | 19.16 |
| AT1G66600.1 | Thale cress | nucleus | 16.91 | 19.09 |
| CDY12284 | Canola | nucleus | 17.65 | 18.6 |
| CDY63078 | Canola | nucleus | 17.65 | 18.6 |
| CDY71652 | Canola | nucleus | 17.65 | 18.6 |
| Bra008459.1-P | Field mustard | nucleus | 17.65 | 18.6 |
| Bra023211.1-P | Field mustard | nucleus | 17.65 | 18.6 |
| OQU78673 | Sorghum | nucleus | 15.81 | 18.3 |
| CDY38684 | Canola | nucleus | 17.28 | 18.22 |
| AT1G66550.1 | Thale cress | nucleus | 16.91 | 18.11 |
| AT1G80590.1 | Thale cress | nucleus | 15.44 | 17.87 |
| AT1G66560.1 | Thale cress | nucleus | 16.18 | 17.67 |
| Bra028918.1-P | Field mustard | nucleus | 18.38 | 17.24 |
| AT5G01900.1 | Thale cress | nucleus | 16.54 | 17.11 |
| CDY26943 | Canola | nucleus | 16.91 | 15.97 |
| Bra002421.1-P | Field mustard | nucleus | 16.91 | 15.97 |
| Bra008456.1-P | Field mustard | nucleus | 14.34 | 15.73 |
| CDY37611 | Canola | nucleus | 14.34 | 15.73 |
| Bra020197.1-P | Field mustard | nucleus | 16.18 | 15.71 |
| Bra020196.1-P | Field mustard | nucleus | 16.18 | 15.49 |
| CDY71866 | Canola | nucleus | 16.18 | 15.49 |
| CDY09147 | Canola | nucleus | 15.44 | 15.05 |
| AT5G22570.1 | Thale cress | nucleus | 15.81 | 14.88 |
| CDY35701 | Canola | nucleus | 15.44 | 14.74 |
| CDY35694 | Canola | nucleus | 12.87 | 11.48 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:C5Y3I2 | EnsemblPlants:EES09141 | ProteinID:EES09141 | ProteinID:EES09141.2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF25 | SMART:SM00774 |
| EnsemblPlantsGene:SORBI_3005G014200 | SUPFAM:SSF118290 | UniParc:UPI00081ADB16 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:1302596..1304021
Molecular Weight (calculated)
30807.6 Da
IEP (calculated)
6.416
GRAVY (calculated)
-0.508
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIKSSLIML PPCSHGWEMM ETMRRQQELV MQLRAFVLPL LPGVIVDGTS AAEIAVQLFD DVIGCNIGVV STLEGCLVST GARGGSSGEP VDNKSLVRKN
101: SCHVTEGETT DEQARHRSVV GQKRRRKNDK RSRSLVTHVP HYDGHQWRKY GQKNINGRQH PRSYYRCTYR EQNCFATKTI QQQEQIDSIR RSATPGEEIA
201: KYTVVYYGEH TCKDHSISIV QLPQLVSCMD LQNMEIAQTS SDVQDPEADL DLPALLEVFD NSVIDWEDIW KI
101: SCHVTEGETT DEQARHRSVV GQKRRRKNDK RSRSLVTHVP HYDGHQWRKY GQKNINGRQH PRSYYRCTYR EQNCFATKTI QQQEQIDSIR RSATPGEEIA
201: KYTVVYYGEH TCKDHSISIV QLPQLVSCMD LQNMEIAQTS SDVQDPEADL DLPALLEVFD NSVIDWEDIW KI
001: MEGRDMLSWE QKTLLSELIN GFDAAKKLQA RLREAPSPSS SFSSPATAVA ETNEILVKQI VSSYERSLLL LNWSSSPSVQ LIPTPVTVVP VANPGSVPES
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
101: PASINGSPRS EEFADGGGSS ESHHRQDYIF NSKKRKMLPK WSEKVRISPE RGLEGPQDDV FSWRKYGQKD ILGAKFPRSY YRCTHRSTQN CWATKQVQRS
201: DGDATVFEVT YRGTHTCSQA ITRTPPLASP EKRQDTRVKP AITQKPKDIL ESLKSNLTVR TDGLDDGKDV FSFPDTPPFY NYGTINGEFG HVESSPIFDV
301: VDWFNPTVEI DTTFPAFLHE SIYY
Arabidopsis Description
WRKY53Probable WRKY transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUP6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.