Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G01900.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G01900.1 | KXG20269 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | KXG20269 | AT4G38130.1 | 18776063 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16607 | Sorghum | nucleus | 56.83 | 57.68 |
| OQU78673 | Sorghum | nucleus | 42.07 | 48.51 |
| Os11t0117400-00 | Rice | nucleus | 42.07 | 42.07 |
| Os12t0116600-01 | Rice | nucleus | 35.79 | 41.99 |
| OQU78675 | Sorghum | nucleus | 19.19 | 24.19 |
| EES09141 | Sorghum | nucleus | 22.14 | 22.06 |
| AT1G80590.1 | Thale cress | nucleus | 18.45 | 21.28 |
| EES09138 | Sorghum | nucleus | 22.51 | 21.11 |
| CDY37614 | Canola | nucleus | 15.13 | 20.71 |
| CDY37613 | Canola | nucleus | 15.13 | 20.71 |
| Bra008454.1-P | Field mustard | nucleus | 14.76 | 20.2 |
| AT1G66600.1 | Thale cress | nucleus | 17.71 | 19.92 |
| AT5G01900.1 | Thale cress | nucleus | 18.45 | 19.01 |
| CDY38684 | Canola | nucleus | 18.08 | 18.99 |
| CDY71652 | Canola | nucleus | 17.71 | 18.6 |
| AT1G66560.1 | Thale cress | nucleus | 16.97 | 18.47 |
| Bra008459.1-P | Field mustard | nucleus | 17.34 | 18.22 |
| CDY04820 | Canola | nucleus | 17.34 | 18.01 |
| EES15637 | Sorghum | nucleus | 21.4 | 17.01 |
| AT1G66550.1 | Thale cress | nucleus | 15.87 | 16.93 |
| CDY63078 | Canola | nucleus | 15.87 | 16.67 |
| Bra028918.1-P | Field mustard | nucleus | 17.34 | 16.21 |
| CDY35701 | Canola | nucleus | 16.97 | 16.14 |
| Bra023211.1-P | Field mustard | nucleus | 15.13 | 15.89 |
| CDY12284 | Canola | nucleus | 15.13 | 15.89 |
| CDY37611 | Canola | nucleus | 14.39 | 15.73 |
| Bra008456.1-P | Field mustard | nucleus | 14.39 | 15.73 |
| CDY09147 | Canola | nucleus | 15.87 | 15.41 |
| Bra020197.1-P | Field mustard | nucleus | 15.5 | 15.0 |
| CDY26943 | Canola | nucleus | 15.87 | 14.93 |
| Bra002421.1-P | Field mustard | nucleus | 14.76 | 13.89 |
| AT5G22570.1 | Thale cress | nucleus | 14.76 | 13.84 |
| CDY71866 | Canola | nucleus | 14.39 | 13.73 |
| Bra020196.1-P | Field mustard | nucleus | 14.39 | 13.73 |
| CDY35694 | Canola | nucleus | 14.39 | 12.79 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:C5Y3H6 | EnsemblPlants:EES09137 | ProteinID:EES09137 | ProteinID:EES09137.2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF31 | SMART:SM00774 |
| EnsemblPlantsGene:SORBI_3005G013800 | SUPFAM:SSF118290 | UniParc:UPI00081ACFF9 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:1245379..1246495
Molecular Weight (calculated)
30679.3 Da
IEP (calculated)
6.283
GRAVY (calculated)
-0.549
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNILESSNL GGYKEVINEV EHQRALMMNL HDLVLPILDP CSGQAKLIQQ LFEEVFSSSG KIISSLELGD NSEKQAILIK HKGKGGKDNV ENHILEENNK
101: DRGNKRRKNA NHISSVVTQT PYFDGCHWRK YGQKWISRAK HSRSYYRCAY SKEQGCPATK TVQQKENDGN GTVRLFNVNY YGQHICNSDG IVHPHVVGAT
201: QDSMPIVSQN QNSSSVFVNT DVHGVQDEIF ESLFMVPDMP EYLTEFVDVE MARAFEITPM NSPMIPEDIW A
101: DRGNKRRKNA NHISSVVTQT PYFDGCHWRK YGQKWISRAK HSRSYYRCAY SKEQGCPATK TVQQKENDGN GTVRLFNVNY YGQHICNSDG IVHPHVVGAT
201: QDSMPIVSQN QNSSSVFVNT DVHGVQDEIF ESLFMVPDMP EYLTEFVDVE MARAFEITPM NSPMIPEDIW A
001: MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
101: RHESSTPIYH DGFLWRKYGQ KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI DTSDFEEHEG SHMIRFGHPN
201: ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS SEVALAVEAF EFNPFWTSHD LSS
Arabidopsis Description
WRKY62WRKY62 [Source:UniProtKB/TrEMBL;Acc:A0A178U8T9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.