Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71866 | Canola | nucleus | 53.63 | 54.58 |
| Bra020196.1-P | Field mustard | nucleus | 53.63 | 54.58 |
| CDY26943 | Canola | nucleus | 52.25 | 52.43 |
| Bra002421.1-P | Field mustard | nucleus | 51.9 | 52.08 |
| CDY35701 | Canola | nucleus | 47.75 | 48.42 |
| CDY09147 | Canola | nucleus | 46.71 | 48.39 |
| Bra020197.1-P | Field mustard | nucleus | 44.98 | 46.43 |
| CDY35694 | Canola | nucleus | 44.64 | 42.3 |
| HORVU2Hr1G098280.1 | Barley | nucleus | 5.54 | 35.56 |
| AT1G66600.1 | Thale cress | nucleus | 27.68 | 33.2 |
| AT1G66560.1 | Thale cress | nucleus | 27.68 | 32.13 |
| AT5G01900.1 | Thale cress | nucleus | 27.34 | 30.04 |
| AT1G80590.1 | Thale cress | nucleus | 23.53 | 28.94 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 6.92 | 27.4 |
| AT1G66550.1 | Thale cress | nucleus | 23.88 | 27.17 |
| OQU78675 | Sorghum | nucleus | 15.92 | 21.4 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 9.69 | 20.59 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 16.26 | 18.73 |
| EES09138 | Sorghum | nucleus | 17.99 | 17.99 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 16.26 | 17.8 |
| Os12t0116700-01 | Rice | nucleus | 19.72 | 17.76 |
| Os11t0117500-01 | Rice | nucleus | 19.38 | 17.5 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 14.53 | 17.0 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 14.88 | 16.93 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 15.22 | 16.73 |
| Zm00001d005056_P001 | Maize | nucleus | 17.3 | 16.61 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 18.69 | 16.56 |
| Zm00001d044682_P001 | Maize | plastid | 14.53 | 16.54 |
| Zm00001d023336_P001 | Maize | nucleus | 16.26 | 16.43 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 17.99 | 16.4 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 17.65 | 16.14 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 14.88 | 16.04 |
| Os12t0116600-01 | Rice | nucleus | 12.8 | 16.02 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 17.3 | 15.82 |
| EES09141 | Sorghum | nucleus | 14.88 | 15.81 |
| OQU78673 | Sorghum | nucleus | 12.8 | 15.74 |
| EES16607 | Sorghum | nucleus | 14.53 | 15.73 |
| Os11t0117400-00 | Rice | nucleus | 14.19 | 15.13 |
| EES09137 | Sorghum | nucleus | 13.84 | 14.76 |
| Zm00001d052358_P001 | Maize | nucleus | 14.88 | 14.1 |
| Zm00001d023332_P001 | Maize | nucleus | 15.22 | 13.58 |
| TraesCS5A01G146500.1 | Wheat | nucleus | 15.22 | 13.02 |
| Os11t0117600-00 | Rice | nucleus | 6.92 | 12.99 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 14.19 | 12.17 |
| EES15637 | Sorghum | nucleus | 14.19 | 12.02 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 13.84 | 11.98 |
| Zm00001d044680_P001 | Maize | nucleus | 13.84 | 11.08 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 13.84 | 10.72 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 6.23 | 9.33 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:832320 | UniProt:A0A178UNG1 | ProteinID:AED93044.1 | EMBL:AF442395 |
| EMBL:AK118884 | ArrayExpress:AT5G22570 | EnsemblPlantsGene:AT5G22570 | RefSeq:AT5G22570 | TAIR:AT5G22570 | RefSeq:AT5G22570-TAIR-G |
| EnsemblPlants:AT5G22570.1 | TAIR:AT5G22570.1 | ProteinID:BAB09129.1 | EMBL:BT005645 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009863 | GO:GO:0009987 | GO:GO:0042742 | GO:GO:0043565 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_197649.2 | ProteinID:OAO95348.1 | PFAM:PF03106 | PO:PO:0000013 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF37 | UniProt:Q8GWF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000000C6E0 | Symbol:WRKY38 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
WRKY38Probable WRKY transcription factor 38 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWF1]
Coordinates
chr5:-:7495455..7496990
Molecular Weight (calculated)
33269.8 Da
IEP (calculated)
5.410
GRAVY (calculated)
-1.153
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES FSNAISILSA KPETEDDQFS DLSSRDSSPP PQGSPSKKRK IDSTNSSENW
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
101: RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
201: QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.