Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU6Hr1G038710.1 | |
| HORVU7Hr1G085870.2 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G003310.1 | Barley | nucleus | 86.67 | 53.42 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 80.0 | 26.47 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 80.0 | 14.34 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 75.56 | 13.39 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 71.11 | 12.96 |
| EES09141 | Sorghum | nucleus | 73.33 | 12.13 |
| Zm00001d005056_P001 | Maize | nucleus | 66.67 | 9.97 |
| CDY37614 | Canola | nucleus | 37.78 | 8.59 |
| Bra008454.1-P | Field mustard | nucleus | 37.78 | 8.59 |
| CDY37613 | Canola | nucleus | 37.78 | 8.59 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 51.11 | 7.06 |
| AT1G80590.1 | Thale cress | nucleus | 33.33 | 6.38 |
| CDY63078 | Canola | nucleus | 35.56 | 6.2 |
| CDY12284 | Canola | nucleus | 35.56 | 6.2 |
| Bra023211.1-P | Field mustard | nucleus | 35.56 | 6.2 |
| CDY04820 | Canola | nucleus | 35.56 | 6.13 |
| CDY09147 | Canola | nucleus | 37.78 | 6.09 |
| Bra020196.1-P | Field mustard | nucleus | 37.78 | 5.99 |
| CDY71866 | Canola | nucleus | 37.78 | 5.99 |
| CDY35701 | Canola | nucleus | 37.78 | 5.96 |
| Bra002421.1-P | Field mustard | nucleus | 37.78 | 5.9 |
| Bra008459.1-P | Field mustard | nucleus | 33.33 | 5.81 |
| CDY71652 | Canola | nucleus | 33.33 | 5.81 |
| Bra020197.1-P | Field mustard | nucleus | 35.56 | 5.71 |
| AT1G66560.1 | Thale cress | nucleus | 31.11 | 5.62 |
| CDY26943 | Canola | nucleus | 35.56 | 5.56 |
| AT5G22570.1 | Thale cress | nucleus | 35.56 | 5.54 |
| Bra028918.1-P | Field mustard | nucleus | 35.56 | 5.52 |
| CDY38684 | Canola | nucleus | 31.11 | 5.43 |
| AT1G66600.1 | Thale cress | nucleus | 28.89 | 5.39 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 44.44 | 5.36 |
| AT5G01900.1 | Thale cress | nucleus | 31.11 | 5.32 |
| AT1G66550.1 | Thale cress | nucleus | 28.89 | 5.12 |
| CDY35694 | Canola | nucleus | 33.33 | 4.92 |
| CDY37611 | Canola | nucleus | 26.67 | 4.84 |
| Bra008456.1-P | Field mustard | nucleus | 26.67 | 4.84 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 15.56 | 3.63 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287J3B4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU2Hr1G098280 | EnsemblPlants:HORVU2Hr1G098280.1 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF25 | SUPFAM:SSF118290 |
| UniParc:UPI000B465A4A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:682399576..682399922
Molecular Weight (calculated)
5616.7 Da
IEP (calculated)
10.857
GRAVY (calculated)
-1.351
Length
45 amino acids
Sequence
(BLAST)
(BLAST)
1: MLCRRNNEKR SRSLVTIVPH YDGHHWRKYG QKNINGRQHA RYIYY
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.