Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71652 | Canola | nucleus | 87.98 | 87.98 |
| CDY37611 | Canola | nucleus | 74.81 | 77.82 |
| CDY37613 | Canola | nucleus | 39.15 | 51.01 |
| CDY37614 | Canola | nucleus | 39.15 | 51.01 |
| AT1G66560.1 | Thale cress | nucleus | 41.09 | 42.57 |
| AT1G66550.1 | Thale cress | nucleus | 41.47 | 42.13 |
| AT1G80590.1 | Thale cress | nucleus | 34.88 | 38.3 |
| AT1G66600.1 | Thale cress | nucleus | 34.88 | 37.34 |
| CDY04820 | Canola | nucleus | 32.17 | 31.8 |
| HORVU2Hr1G098280.1 | Barley | nucleus | 5.43 | 31.11 |
| CDY12284 | Canola | nucleus | 29.84 | 29.84 |
| CDY63078 | Canola | nucleus | 29.84 | 29.84 |
| CDY35701 | Canola | nucleus | 28.68 | 25.96 |
| CDY71866 | Canola | nucleus | 28.29 | 25.7 |
| CDY09147 | Canola | nucleus | 26.74 | 24.73 |
| CDY26943 | Canola | nucleus | 27.52 | 24.65 |
| HORVU2Hr1G003310.1 | Barley | nucleus | 6.59 | 23.29 |
| CDY35694 | Canola | nucleus | 25.97 | 21.97 |
| OQU78675 | Sorghum | nucleus | 17.44 | 20.93 |
| TraesCS2A01G021400.1 | Wheat | nucleus | 10.47 | 19.85 |
| TraesCS2A01G019300.1 | Wheat | nucleus | 18.99 | 19.52 |
| TraesCS2D01G051000.1 | Wheat | nucleus | 18.22 | 19.03 |
| TraesCS5B01G145400.1 | Wheat | nucleus | 18.99 | 18.63 |
| TraesCS2A01G052100.1 | Wheat | nucleus | 17.83 | 18.11 |
| EES09137 | Sorghum | nucleus | 18.99 | 18.08 |
| EES09138 | Sorghum | nucleus | 20.16 | 17.99 |
| Os12t0116600-01 | Rice | nucleus | 15.89 | 17.75 |
| TraesCS5D01G145700.1 | Wheat | nucleus | 17.83 | 17.42 |
| EES09141 | Sorghum | nucleus | 18.22 | 17.28 |
| EES16607 | Sorghum | nucleus | 17.83 | 17.23 |
| TraesCS5A01G146600.1 | Wheat | nucleus | 17.83 | 17.16 |
| Os12t0116700-01 | Rice | nucleus | 21.32 | 17.13 |
| Zm00001d044682_P001 | Maize | plastid | 16.67 | 16.93 |
| Zm00001d023336_P001 | Maize | nucleus | 18.22 | 16.43 |
| Zm00001d005056_P001 | Maize | nucleus | 18.99 | 16.28 |
| Os11t0117500-01 | Rice | nucleus | 20.16 | 16.25 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 19.77 | 16.14 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 19.77 | 16.09 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 20.16 | 15.95 |
| Os11t0117600-00 | Rice | nucleus | 9.3 | 15.58 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 18.99 | 15.51 |
| Os11t0117400-00 | Rice | nucleus | 16.28 | 15.5 |
| OQU78673 | Sorghum | nucleus | 13.57 | 14.89 |
| Zm00001d052358_P001 | Maize | nucleus | 17.44 | 14.75 |
| TraesCS5A01G146500.1 | Wheat | nucleus | 16.28 | 12.43 |
| Zm00001d023332_P001 | Maize | nucleus | 15.5 | 12.35 |
| EES15637 | Sorghum | nucleus | 16.28 | 12.32 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 15.89 | 12.17 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 15.5 | 11.98 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 17.05 | 11.8 |
| Zm00001d044680_P001 | Maize | nucleus | 14.73 | 10.53 |
| TraesCS2D01G051500.1 | Wheat | cytosol | 7.36 | 9.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HMU9 | UniProt:A0A078HMU9 | EnsemblPlants:CDY38684 | ProteinID:CDY38684 |
| ProteinID:CDY38684.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00066423001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR32096 |
| PANTHER:PTHR32096:SF36 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE1304 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g22950DBnaC02g22950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMU9]
Coordinates
chrLK032429:-:318151..319130
Molecular Weight (calculated)
29452.6 Da
IEP (calculated)
5.159
GRAVY (calculated)
-0.590
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHGIDKAVE ALLRGQESAY RLKTVLEHAS SVPTEPLFDT VLDSFSFALS LFASSNPQPH RESSQNKATP VVAQKSPKKN SHGEECLEQY IQDSPTPFCN
101: DGFSWRKYGQ KKIKTSSHQR CYYRCAYAKD RNCNATKRVQ QIQNSPSVYR TTYVGKHICE VNAFLQPNED IINGSKMIRF DKIDQVMPDS VMPQLVPVEQ
201: QEAIIIEGTD QIMNLECGSN EFLVDDEQLW EYQFPPCSPG NFMFLDDLSE FDYNPFHV
101: DGFSWRKYGQ KKIKTSSHQR CYYRCAYAKD RNCNATKRVQ QIQNSPSVYR TTYVGKHICE VNAFLQPNED IINGSKMIRF DKIDQVMPDS VMPQLVPVEQ
201: QEAIIIEGTD QIMNLECGSN EFLVDDEQLW EYQFPPCSPG NFMFLDDLSE FDYNPFHV
001: MFSNIDQTAV AALLRGQGCA NSLKRLLENH KLSSDSTEPL IYTILNSFSL ALSFVDPPSL LPHNESSLQN MTSHVLQRSS KKKYYGAEDL EYYRDESPTP
101: RPDDGFTWRK YGQKTIKTSP YQRCYYRCTY AKDQNCNARK RVQMIQDNPP VYRTTYLGKH VCKAVAVHDD TYGSEMIKFD QVVSESVMPQ LATIDEQAIT
201: MEDEAIDHIM NQECDINDFS VDDDPFWASQ FPPFSSEDIM FFDNIANLD
101: RPDDGFTWRK YGQKTIKTSP YQRCYYRCTY AKDQNCNARK RVQMIQDNPP VYRTTYLGKH VCKAVAVHDD TYGSEMIKFD QVVSESVMPQ LATIDEQAIT
201: MEDEAIDHIM NQECDINDFS VDDDPFWASQ FPPFSSEDIM FFDNIANLD
Arabidopsis Description
WRKY64Probable WRKY transcription factor 64 [Source:UniProtKB/Swiss-Prot;Acc:Q9C557]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.