Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G01900.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G01900.1 | KXG20269 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | EES04741 | AT4G38130.1 | 18776063 |
| AT5G22570.1 | KXG20269 | AT4G38130.1 | 18776063 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78675 | Sorghum | nucleus | 39.45 | 53.02 |
| Os12t0116700-01 | Rice | nucleus | 46.71 | 42.06 |
| Os11t0117500-01 | Rice | nucleus | 45.67 | 41.25 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 42.56 | 38.92 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 42.21 | 38.49 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 41.18 | 37.66 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 40.83 | 36.2 |
| EES09141 | Sorghum | nucleus | 27.68 | 29.41 |
| EES16607 | Sorghum | nucleus | 23.88 | 25.84 |
| OQU78673 | Sorghum | nucleus | 19.38 | 23.83 |
| AT1G66600.1 | Thale cress | nucleus | 19.72 | 23.65 |
| EES09137 | Sorghum | nucleus | 21.11 | 22.51 |
| AT1G66560.1 | Thale cress | nucleus | 19.38 | 22.49 |
| AT1G80590.1 | Thale cress | nucleus | 17.99 | 22.13 |
| CDY04820 | Canola | nucleus | 18.69 | 20.69 |
| CDY12284 | Canola | nucleus | 17.99 | 20.16 |
| Bra023211.1-P | Field mustard | nucleus | 17.99 | 20.16 |
| CDY63078 | Canola | nucleus | 17.99 | 20.16 |
| CDY38684 | Canola | nucleus | 17.99 | 20.16 |
| CDY71866 | Canola | nucleus | 19.72 | 20.07 |
| Bra020196.1-P | Field mustard | nucleus | 19.72 | 20.07 |
| EES15637 | Sorghum | nucleus | 23.53 | 19.94 |
| CDY37614 | Canola | nucleus | 13.49 | 19.7 |
| CDY37613 | Canola | nucleus | 13.49 | 19.7 |
| Bra008454.1-P | Field mustard | nucleus | 13.49 | 19.7 |
| CDY71652 | Canola | nucleus | 17.3 | 19.38 |
| Bra002421.1-P | Field mustard | nucleus | 19.03 | 19.1 |
| Bra008459.1-P | Field mustard | nucleus | 16.95 | 18.99 |
| AT1G66550.1 | Thale cress | nucleus | 16.61 | 18.9 |
| CDY26943 | Canola | nucleus | 17.99 | 18.06 |
| AT5G22570.1 | Thale cress | nucleus | 17.99 | 17.99 |
| CDY09147 | Canola | nucleus | 17.3 | 17.92 |
| Bra020197.1-P | Field mustard | nucleus | 17.3 | 17.86 |
| Bra028918.1-P | Field mustard | nucleus | 17.65 | 17.59 |
| CDY35701 | Canola | nucleus | 17.3 | 17.54 |
| AT5G01900.1 | Thale cress | nucleus | 15.92 | 17.49 |
| Bra008456.1-P | Field mustard | nucleus | 14.53 | 16.94 |
| CDY37611 | Canola | nucleus | 14.53 | 16.94 |
| CDY35694 | Canola | nucleus | 17.3 | 16.39 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:C5Y3H8 | EnsemblPlants:EES09138 | ProteinID:EES09138 | ProteinID:EES09138.2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF17 | SMART:SM00774 |
| EnsemblPlantsGene:SORBI_3005G014000 | SUPFAM:SSF118290 | UniParc:UPI00081AB8DA | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr5:-:1261347..1263314
Molecular Weight (calculated)
33046.2 Da
IEP (calculated)
6.744
GRAVY (calculated)
-0.996
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHQQYNSRC LAESSASDHR SAVKEIARGQ SLVTQLRAIV LPVLQADERS ELVAQMFQNI LDCSSKAMAE LQMHQSRSTR RPHDDDDVLV DDKKRVKKIS
101: SVDCKNEEGV TAAKPRHQHK RRRFDDSVSL ETPVPHYDGR QWRKYGQKHI NNTKHSRSYY RCTYRQEQGC KATKTVQQQD DSSGADHTLM YTVVYYGQHT
201: CKDNDGANSS PDDSEINTRS SSDSHSSISS TCTDPCDHQN QTSLHEDKPF VNKSEELVTK DMYEPFEMTV FAPLDLDSWE LDALLRFGP
101: SVDCKNEEGV TAAKPRHQHK RRRFDDSVSL ETPVPHYDGR QWRKYGQKHI NNTKHSRSYY RCTYRQEQGC KATKTVQQQD DSSGADHTLM YTVVYYGQHT
201: CKDNDGANSS PDDSEINTRS SSDSHSSISS TCTDPCDHQN QTSLHEDKPF VNKSEELVTK DMYEPFEMTV FAPLDLDSWE LDALLRFGP
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.