Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0214900-01 | |
| Os02t0215200-02 | |
| Os06t0583400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0117500-01 | Rice | nucleus | 90.34 | 90.62 |
| EES09138 | Sorghum | nucleus | 42.06 | 46.71 |
| TraesCS5D01G145600.1 | Wheat | nucleus | 40.81 | 41.46 |
| TraesCS5B01G145500.1 | Wheat | nucleus | 40.5 | 41.14 |
| TraesCS5A01G146700.1 | Wheat | nucleus | 40.19 | 40.69 |
| HORVU5Hr1G046430.1 | Barley | nucleus | 40.19 | 39.57 |
| OQU78675 | Sorghum | nucleus | 26.48 | 39.53 |
| Os11t0117400-00 | Rice | nucleus | 24.92 | 29.52 |
| Os12t0116600-01 | Rice | nucleus | 20.56 | 28.57 |
| CDY63078 | Canola | nucleus | 19.31 | 24.03 |
| AT1G66600.1 | Thale cress | nucleus | 17.76 | 23.65 |
| Bra023211.1-P | Field mustard | nucleus | 19.0 | 23.64 |
| CDY12284 | Canola | nucleus | 19.0 | 23.64 |
| CDY04820 | Canola | nucleus | 18.69 | 22.99 |
| AT1G80590.1 | Thale cress | nucleus | 16.82 | 22.98 |
| CDY09147 | Canola | nucleus | 19.63 | 22.58 |
| Bra008454.1-P | Field mustard | nucleus | 13.71 | 22.22 |
| CDY37613 | Canola | nucleus | 13.71 | 22.22 |
| CDY37614 | Canola | nucleus | 13.71 | 22.22 |
| Bra020196.1-P | Field mustard | nucleus | 19.63 | 22.18 |
| CDY71866 | Canola | nucleus | 19.63 | 22.18 |
| Bra002421.1-P | Field mustard | nucleus | 19.63 | 21.88 |
| Bra020197.1-P | Field mustard | nucleus | 19.0 | 21.79 |
| AT1G66560.1 | Thale cress | nucleus | 16.82 | 21.69 |
| Os11t0117600-00 | Rice | nucleus | 10.28 | 21.43 |
| CDY38684 | Canola | nucleus | 17.13 | 21.32 |
| CDY26943 | Canola | nucleus | 19.0 | 21.18 |
| CDY71652 | Canola | nucleus | 16.82 | 20.93 |
| Bra008459.1-P | Field mustard | nucleus | 16.82 | 20.93 |
| CDY35701 | Canola | nucleus | 18.38 | 20.7 |
| AT1G66550.1 | Thale cress | nucleus | 16.2 | 20.47 |
| AT5G01900.1 | Thale cress | nucleus | 16.51 | 20.15 |
| AT5G22570.1 | Thale cress | nucleus | 17.76 | 19.72 |
| Bra028918.1-P | Field mustard | nucleus | 17.76 | 19.66 |
| CDY37611 | Canola | nucleus | 14.95 | 19.35 |
| Bra008456.1-P | Field mustard | nucleus | 14.95 | 19.35 |
| CDY35694 | Canola | nucleus | 16.82 | 17.7 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4351328 | ProteinID:ABA95641.1 | ProteinID:BAT15610.1 | ProteinID:EAZ36199.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | EnsemblPlantsGene:Os12g0116700 | EnsemblPlants:Os12t0116700-01 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 |
| PANTHER:PTHR31282:SF17 | UniProt:Q2QYJ6 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0000681B64 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | RefSeq:XP_015620021.1 | SEG:seg | : | : | : |
Description
WRKY GENE 64Similar to WRKY transcription factor 64. (Os12t0116700-01)
Coordinates
chr12:-:824221..825793
Molecular Weight (calculated)
35751.3 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.723
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNSSNKRPL VADQWHPSSV CCDHRAALRE IARGQSLVTQ LRAIVLPALH SDERGDLAAQ MLEGILDCSR KAISELQLQL SSDSPHDDDG HLDDKRRVRK
101: IVSSSSDDDD HSSSKAAEDH NAKPLRQHKR RRFGDSVSLE TPVPHYDGHQ WRKYGQKHIN NSKHPRSYYR CTYRQEEKCK ATKTVQQRED LHHANSYNGD
201: HPVMYTVVYY GQHTCCKGPA ASADDHVVVE ASQISTDSHC QSPGSSSSEL QAAAHAGDSS QCSNISVTCS SSVVVEDCNK LLDMLPAADE LTTDVLLFDM
301: TAYAPLDLDI NWEMDTNALW A
101: IVSSSSDDDD HSSSKAAEDH NAKPLRQHKR RRFGDSVSLE TPVPHYDGHQ WRKYGQKHIN NSKHPRSYYR CTYRQEEKCK ATKTVQQRED LHHANSYNGD
201: HPVMYTVVYY GQHTCCKGPA ASADDHVVVE ASQISTDSHC QSPGSSSSEL QAAAHAGDSS QCSNISVTCS SSVVVEDCNK LLDMLPAADE LTTDVLLFDM
301: TAYAPLDLDI NWEMDTNALW A
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
Arabidopsis Description
WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.