Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0214900-01 | |
| Os02t0215200-02 | |
| Os06t0583400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G146500.1 | Wheat | nucleus | 40.91 | 18.64 |
| TraesCS5B01G145300.1 | Wheat | nucleus | 39.61 | 18.1 |
| TraesCS5D01G145800.1 | Wheat | nucleus | 37.66 | 17.37 |
| EES15637 | Sorghum | nucleus | 38.31 | 17.3 |
| HORVU5Hr1G046390.2 | Barley | nucleus, plastid | 38.31 | 15.82 |
| Zm00001d023332_P001 | Maize | nucleus | 31.82 | 15.12 |
| Zm00001d044680_P001 | Maize | nucleus | 30.52 | 13.02 |
| Os11t0117400-00 | Rice | nucleus | 20.13 | 11.44 |
| Os12t0116600-01 | Rice | nucleus | 16.23 | 10.82 |
| Os12t0116700-01 | Rice | nucleus | 21.43 | 10.28 |
| Os11t0117500-01 | Rice | nucleus | 20.13 | 9.69 |
| CDY38684 | Canola | nucleus | 15.58 | 9.3 |
| AT1G66600.1 | Thale cress | nucleus | 14.29 | 9.13 |
| Bra023211.1-P | Field mustard | nucleus | 14.94 | 8.91 |
| CDY12284 | Canola | nucleus | 14.94 | 8.91 |
| CDY63078 | Canola | nucleus | 14.94 | 8.91 |
| Bra008459.1-P | Field mustard | nucleus | 13.64 | 8.14 |
| CDY71652 | Canola | nucleus | 13.64 | 8.14 |
| AT1G80590.1 | Thale cress | nucleus | 12.34 | 8.09 |
| AT1G66560.1 | Thale cress | nucleus | 12.99 | 8.03 |
| Bra002421.1-P | Field mustard | nucleus | 14.94 | 7.99 |
| AT5G01900.1 | Thale cress | nucleus | 13.64 | 7.98 |
| CDY04820 | Canola | nucleus | 12.99 | 7.66 |
| CDY26943 | Canola | nucleus | 14.29 | 7.64 |
| CDY37611 | Canola | nucleus | 11.69 | 7.26 |
| Bra008456.1-P | Field mustard | nucleus | 11.69 | 7.26 |
| Bra028918.1-P | Field mustard | nucleus | 13.64 | 7.24 |
| AT1G66550.1 | Thale cress | nucleus | 11.69 | 7.09 |
| CDY37614 | Canola | nucleus | 9.09 | 7.07 |
| AT5G22570.1 | Thale cress | nucleus | 12.99 | 6.92 |
| Bra008454.1-P | Field mustard | nucleus | 8.44 | 6.57 |
| CDY37613 | Canola | nucleus | 8.44 | 6.57 |
| Bra020197.1-P | Field mustard | nucleus | 11.69 | 6.43 |
| CDY35701 | Canola | nucleus | 11.04 | 5.96 |
| CDY71866 | Canola | nucleus | 10.39 | 5.63 |
| Bra020196.1-P | Field mustard | nucleus | 10.39 | 5.63 |
| CDY35694 | Canola | nucleus | 11.04 | 5.57 |
| CDY09147 | Canola | nucleus | 9.74 | 5.38 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0P0XYH5 | ProteinID:BAT12423.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os11g0117600 |
| EnsemblPlants:Os11t0117600-00 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF36 | SUPFAM:SSF118290 |
| UniParc:UPI000393A373 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY GENE 50Similar to WRKY transcription factor 50 (Fragment). (Os11t0117600-00)
Coordinates
chr11:-:794803..795540
Molecular Weight (calculated)
17030.2 Da
IEP (calculated)
8.486
GRAVY (calculated)
-0.709
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAYCMMMV GRERELVAEL RHLLFPSPSP TPTTPASHST TALAGDGECC LPPGLTTTTT VSGGGRRRGR KRVNRDNDNV KLLLQADDDQ EAVIADHGDA
101: NAKPLPNFTK TRRRKQQATT STMVTTVPDF DGYQWRKYGQ KQIEGALYPS VINH
101: NAKPLPNFTK TRRRKQQATT STMVTTVPDF DGYQWRKYGQ KQIEGALYPS VINH
001: MNGLVDSSRD KKMKNPRFSF RTKSDADILD DGYRWRKYGQ KSVKNSLYPR CTQHMCNVKK QVQRLSKETS IVETTYEGIH NHPCEELMQT LTPLLHQLQF
101: LSKFT
101: LSKFT
Arabidopsis Description
WRKY43Probable WRKY transcription factor 43 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.