Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0214900-01 | |
| Os02t0215200-02 | |
| Os06t0583400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0117400-00 | Rice | nucleus | 98.7 | 84.13 |
| EES16607 | Sorghum | nucleus | 46.32 | 40.07 |
| Zm00001d023336_P001 | Maize | nucleus | 45.45 | 36.71 |
| Zm00001d044682_P001 | Maize | plastid | 39.39 | 35.83 |
| EES09137 | Sorghum | nucleus | 41.99 | 35.79 |
| OQU78673 | Sorghum | nucleus | 30.74 | 30.21 |
| Zm00001d052358_P001 | Maize | nucleus | 39.83 | 30.16 |
| CDY37614 | Canola | nucleus | 17.75 | 20.71 |
| CDY37613 | Canola | nucleus | 17.75 | 20.71 |
| Os12t0116700-01 | Rice | nucleus | 28.57 | 20.56 |
| AT1G80590.1 | Thale cress | nucleus | 20.78 | 20.43 |
| Bra008454.1-P | Field mustard | nucleus | 17.32 | 20.2 |
| Os11t0117500-01 | Rice | nucleus | 27.71 | 20.0 |
| AT1G66600.1 | Thale cress | nucleus | 19.91 | 19.09 |
| AT1G66560.1 | Thale cress | nucleus | 20.35 | 18.88 |
| CDY04820 | Canola | nucleus | 19.91 | 17.62 |
| CDY12284 | Canola | nucleus | 19.05 | 17.05 |
| CDY26943 | Canola | nucleus | 21.21 | 17.01 |
| AT1G66550.1 | Thale cress | nucleus | 18.61 | 16.93 |
| CDY63078 | Canola | nucleus | 18.61 | 16.67 |
| Bra023211.1-P | Field mustard | nucleus | 18.61 | 16.67 |
| Bra002421.1-P | Field mustard | nucleus | 20.35 | 16.32 |
| CDY71652 | Canola | nucleus | 18.18 | 16.28 |
| Bra008459.1-P | Field mustard | nucleus | 18.18 | 16.28 |
| Os11t0117600-00 | Rice | nucleus | 10.82 | 16.23 |
| CDY38684 | Canola | nucleus | 17.75 | 15.89 |
| AT5G01900.1 | Thale cress | nucleus | 17.32 | 15.21 |
| Bra028918.1-P | Field mustard | nucleus | 18.61 | 14.83 |
| CDY35701 | Canola | nucleus | 18.18 | 14.74 |
| CDY37611 | Canola | nucleus | 15.15 | 14.11 |
| Bra008456.1-P | Field mustard | nucleus | 15.15 | 14.11 |
| CDY35694 | Canola | nucleus | 18.61 | 14.1 |
| CDY71866 | Canola | nucleus | 17.32 | 14.08 |
| Bra020196.1-P | Field mustard | nucleus | 17.32 | 14.08 |
| CDY09147 | Canola | nucleus | 16.02 | 13.26 |
| Bra020197.1-P | Field mustard | nucleus | 16.02 | 13.21 |
| AT5G22570.1 | Thale cress | nucleus | 16.02 | 12.8 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0P0Y678 | ProteinID:BAT15609.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os12g0116600 |
| EnsemblPlants:Os12t0116600-01 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31282 | PANTHER:PTHR31282:SF31 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000393944B | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
WRKY GENE 95Similar to Transcription factor (Fragment). (Os12t0116600-01)
Coordinates
chr12:-:817004..820412
Molecular Weight (calculated)
26154.4 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.817
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: LLGDILSCSD KAISMLELGG DTNKLTNLVG GKRKGDKHIM DNHNLEEEAK ESVSKRRKNA EHTGSTVAQA PHNDGHQWRK YGQKWISRAK HSRSYYRCAN
101: SKVQGCPATK TVQQMDSSGN GTSKLFNVDY YGQHTCRGDG IANPYVVDTA HHSMEPINQN ECNSPTLEHE AHEVQDERFE NLCMVQNMPE YLIDFELERA
201: FEFIVNSPLG SEHWTFDDSI RCEHSPICIW G
101: SKVQGCPATK TVQQMDSSGN GTSKLFNVDY YGQHTCRGDG IANPYVVDTA HHSMEPINQN ECNSPTLEHE AHEVQDERFE NLCMVQNMPE YLIDFELERA
201: FEFIVNSPLG SEHWTFDDSI RCEHSPICIW G
001: MMMEEKLVIN ELELGKELAN RLMNNLKHTS SVDSNKTLIS DILRIYQNAI FMLSFNQDKN ILKRSLEIDG KDSKNVFKKR KVSEKNTEKV KVFVATEQEN
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
101: GSIDDGHCWR KYGQKEIHGS KNPRAYYRCT HRFTQDCLAV KQVQKSDTDP SLFEVKYLGN HTCNNITSPK TTTNFSVSLT NTNIFEGNRV HVTEQSEDMK
201: PTKSEEVMIS LEDLENKKNI FRTFSFSNHE IENGVWKSNL FLGNFVEDLS PATSGSAITS EVLSAPAAVE NSETADSYFS SLDNIIDFGQ DWLWS
Arabidopsis Description
WRKY46Probable WRKY transcription factor 46 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.