Factsheet for Zm00001d044680_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014076_P001
Zm00001d016381_P001
Zm00001d018346_P001
Zm00001d039202_P001
Zm00001d046388_P001
Zm00001d053595_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01900.1	Zm00001d014076_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d016381_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d018346_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d039202_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d046388_P001	AT4G38130.1	18776063
AT5G01900.1	Zm00001d053595_P004	AT4G38130.1	18776063
AT5G22570.1	Zm00001d014076_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d016381_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d018346_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d039202_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d046388_P001	AT4G38130.1	18776063
AT5G22570.1	Zm00001d053595_P004	AT4G38130.1	18776063

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15637	Sorghum	nucleus	35.18	37.24
Zm00001d023332_P001	Maize	nucleus	33.24	37.04
Os11t0117600-00	Rice	nucleus	13.02	30.52
TraesCS5B01G145300.1	Wheat	nucleus	26.87	28.78
TraesCS5A01G146500.1	Wheat	nucleus	26.87	28.7
TraesCS5D01G145800.1	Wheat	nucleus	26.32	28.44
HORVU5Hr1G046390.2	Barley	nucleus, plastid	26.32	25.47
Zm00001d005056_P001	Maize	nucleus	15.79	18.94
Zm00001d044682_P001	Maize	plastid	13.3	18.9
Bra023211.1-P	Field mustard	nucleus	13.3	18.6
AT1G66600.1	Thale cress	nucleus	12.19	18.26
CDY63078	Canola	nucleus	13.02	18.22
CDY12284	Canola	nucleus	13.02	18.22
AT1G66560.1	Thale cress	nucleus	12.47	18.07
CDY04820	Canola	nucleus	12.74	17.62
Zm00001d023336_P001	Maize	nucleus	13.85	17.48
AT5G01900.1	Thale cress	nucleus	12.47	17.11
Bra008454.1-P	Field mustard	nucleus	8.86	16.16
AT1G80590.1	Thale cress	nucleus	10.25	15.74
Zm00001d052358_P001	Maize	nucleus	13.3	15.74
CDY37613	Canola	nucleus	8.59	15.66
CDY37614	Canola	nucleus	8.59	15.66
AT1G66550.1	Thale cress	nucleus	10.53	14.96
CDY26943	Canola	nucleus	11.91	14.93
CDY38684	Canola	nucleus	10.53	14.73
CDY71866	Canola	nucleus	11.36	14.44
Bra020196.1-P	Field mustard	nucleus	11.36	14.44
CDY71652	Canola	nucleus	10.25	14.34
Bra002421.1-P	Field mustard	nucleus	11.36	14.24
Bra028918.1-P	Field mustard	nucleus	11.36	14.14
Bra008459.1-P	Field mustard	nucleus	9.97	13.95
AT5G22570.1	Thale cress	nucleus	11.08	13.84
Bra020197.1-P	Field mustard	nucleus	10.25	13.21
CDY09147	Canola	nucleus	9.97	12.9
Bra008456.1-P	Field mustard	nucleus	8.59	12.5
CDY37611	Canola	nucleus	8.59	12.5
CDY35694	Canola	nucleus	10.53	12.46
CDY35701	Canola	nucleus	9.14	11.58

Protein Annotations

EntrezGene:103651699	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6NQP5	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	ProteinID:ONM42250.1
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31282	PANTHER:PTHR31282:SF36	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI0004DE8ED5	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d044680	EnsemblPlants:Zm00001d044680_P001	EnsemblPlants:Zm00001d044680_T001
SEG:seg	:	:	:	:	:

Description

WRKY-transcription factor 5Probable WRKY transcription factor 38

Coordinates

chr3:+:234675094..234677643

Molecular Weight (calculated)

38553.3 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.638

Length

361 amino acids

Sequence
(BLAST)

001: MAALAGRGEE LLEQLRALLF LPAASSATPA ANKVESAAVG PGGGAVAAPS SCGRRRRRQG QEGGKRDRDD DGVRDGEHAA DDDGARPQHP PPPRCCKRRK
101: KKKQESKSTV TSVLDFDGYR WRKYGQKQIE GAMYPRSYYR CIRSAEQGCP AKRTVQRNDD HGGGAAVAPE YTVVYMAEHT CTADDDYLQA APVILDTATV
201: VVPSAAAAAA SSAGATANEG RRRPQDDNDS TYTDISIVIP TTSAGSCSTT STTITTGTES RATSSDDVTC WSSSSGTSSD YNRAHYNNKT DDFYYGGLFA
301: AAAHDGGGWT IGPADDSASL QEIWDLTGPI RSPVHVPALG WNWNMDQQLL LQLVNEPGCH F

Best Arabidopsis Sequence Match ( AT3G56400.1 )
(BLAST)

001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS

Arabidopsis Description

WRKY70Probable WRKY transcription factor 70 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY00]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.