Factsheet for HORVU6Hr1G079710.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G306300.1	Wheat	nucleus	83.55	92.67
TraesCS6A01G326500.2	Wheat	nucleus	81.77	91.68
TraesCS6B01G357600.1	Wheat	nucleus	82.74	91.61
EES05866	Sorghum	nucleus	56.29	60.38
Os02t0770500-00	Rice	nucleus	62.9	60.09
Zm00001d018203_P001	Maize	nucleus	54.35	58.2
GSMUA_Achr3P20290_001	Banana	nucleus	28.71	46.48
CDX81493	Canola	nucleus	22.26	44.52
GSMUA_Achr7P18820_001	Banana	nucleus	32.1	44.32
GSMUA_Achr10P...	Banana	nucleus	33.39	43.22
GSMUA_Achr6P02330_001	Banana	nucleus	25.32	42.55
CDX96044	Canola	nucleus	21.61	40.85
KRH42243	Soybean	nucleus	11.77	40.33
Bra004285.1-P	Field mustard	nucleus	21.29	40.24
CDY01891	Canola	nucleus	21.29	40.24
AT1G68150.1	Thale cress	nucleus	22.74	37.7
PGSC0003DMT400076591	Potato	nucleus	25.0	37.53
Solyc01g104550.2.1	Tomato	nucleus	27.26	35.58
VIT_12s0055g00340.t01	Wine grape	nucleus	26.94	34.29
KRH58361	Soybean	nucleus	25.81	32.99
HORVU5Hr1G065380.2	Barley	nucleus	8.23	29.31
HORVU3Hr1G020210.2	Barley	nucleus	21.29	25.1
HORVU7Hr1G113830.1	Barley	nucleus	11.45	22.26
HORVU6Hr1G028790.1	Barley	nucleus	12.26	21.53
HORVU3Hr1G033740.2	Barley	nucleus, plastid	21.77	21.46
HORVU7Hr1G021260.1	Barley	nucleus	20.65	21.02
HORVU7Hr1G113850.4	Barley	nucleus, plastid	12.1	18.47
HORVU5Hr1G065420.15	Barley	nucleus	11.13	17.65

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287UVG1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU6Hr1G079710	EnsemblPlants:HORVU6Hr1G079710.2	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF34	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000B46F1CA	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:538586222..538588908

Molecular Weight (calculated)

65307.4 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.661

Length

620 amino acids

Sequence
(BLAST)

001: RSLPSSLTFL IHIRHPDIDL AASGEAALGF KTVPPFSCSS LAERQRYTQE TGQGSIMSSS KRKRADIDLE RRDDDGDDGS GDHQPVEAAP APPRLQKEGQ
101: IKEGEAQAKE VVEVVVDRGG DASKEEIKYG TQQEGLMEED KQSAAAAAGS DGGGGVDDEE NDGPGTRAED KHMVEAAPGD GNGDGDHDHT AMAQDELSTM
201: QEEMEKMKEE NKMLRRVVDR TVRDYYELQT KLAAYQKQPA DQEPKETEVF LSLGGTAPAV AEAKSKEEQA ARRPSVGSDD TDDGREGLGL SLSLRTSSYE
301: DETRHDVVDG GAPDIVSDVG KARGYALLES SRMSPPASGD VAAAGGIAGQ QGVNAANRKT RVSVRVRCQG PTMNDGCQWR KYGQKVAKGN PCPRAYYRCT
401: VAPACPVRKQ VVQRCQEDMS ILITTYEGTH NHPLPVGATA MASTATAGTG AATFMLLSST SSDAAVSSGP PPASSSYLSP YLQLNSSSQY HSSVSPLVSG
501: TMGGGGAQHL SMFGHSSALA AQPATHLKYP WPPNPSHGGA AGLGGSKRPF WGNGGVDDVR PTAALPDNAG TMASDPNQFS AAIATAISNV IGKDGQTAAR
601: RKEGESSNKW GVVESLPPHD

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.