Factsheet for Solyc01g104550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076591	Potato	nucleus	84.21	96.85
CDX81493	Canola	nucleus	33.47	51.29
Bra004285.1-P	Field mustard	nucleus	33.47	48.48
CDX96044	Canola	nucleus	33.26	48.17
CDY01891	Canola	nucleus	33.05	47.87
VIT_12s0055g00340.t01	Wine grape	nucleus	47.58	46.41
KRH58361	Soybean	nucleus	46.32	45.36
AT1G68150.1	Thale cress	nucleus	33.47	42.51
GSMUA_Achr3P20290_001	Banana	nucleus	31.37	38.9
GSMUA_Achr6P02330_001	Banana	nucleus	28.84	37.13
GSMUA_Achr7P18820_001	Banana	nucleus	34.32	36.3
GSMUA_Achr10P...	Banana	nucleus	36.42	36.12
Solyc12g042590.1.1	Tomato	nucleus	14.95	32.87
EES05866	Sorghum	nucleus	37.47	30.8
TraesCS6A01G326500.2	Wheat	nucleus	35.58	30.56
TraesCS6D01G306300.1	Wheat	nucleus	35.58	30.23
Zm00001d018203_P001	Maize	nucleus	36.84	30.22
TraesCS6B01G357600.1	Wheat	nucleus	35.16	29.82
Solyc08g067360.2.1	Tomato	nucleus	16.0	29.46
Solyc05g007110.2.1	Tomato	nucleus	24.21	29.34
Solyc08g067340.2.1	Tomato	nucleus	15.37	28.85
Solyc02g067430.2.1	Tomato	nucleus	26.53	28.64
Solyc03g113120.2.1	Tomato	nucleus	30.74	27.86
Os02t0770500-00	Rice	nucleus	37.89	27.73
HORVU6Hr1G079710.2	Barley	nucleus	35.58	27.26
Solyc02g032950.2.1	Tomato	nucleus	28.21	26.91
Solyc02g080890.2.1	Tomato	nucleus	28.42	24.55
Solyc06g068460.2.1	Tomato	nucleus	17.89	23.61
Solyc03g116890.2.1	Tomato	nucleus	17.26	23.43
Solyc07g051840.2.1	Tomato	nucleus	28.63	21.55
Solyc06g070990.2.1	Tomato	nucleus	28.42	20.8

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4B229	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc01g104550.2
EnsemblPlants:Solyc01g104550.2.1	UniParc:UPI00027689BB	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Probable WRKY transcription factor 9 [Source:Projected from Arabidopsis thaliana (AT1G68150) UniProtKB/Swiss-Prot;Acc:Q9C9F0]

Coordinates

chr1:+:93018986..93021383

Molecular Weight (calculated)

52987.3 Da

IEP (calculated)

6.549

GRAVY (calculated)

-0.921

Length

475 amino acids

Sequence
(BLAST)

001: MENNKSENDN EVEIDLSLKL DAREEENEEN QIVESSQLNE KTQPKDQELP KTHEELSMLE KEMKRMKEEN KVLRKAVEQT MKDYYDLQAK FSIHQNNHKD
101: HKSFLSLSGN DDTNEGQTKV PKILDILNTN RISSPTSLED DTMDGDHELG LSLTLVSSNS TTSSKLVEIL EEDQRKEKKD HPSINHQLQN KPQNLGGLTS
201: HVTTASPPNR KSRVSVRARC ESATMNDGCQ WRKYGQKIAK GSPNCPRAYY RCTVAPGCPV RKQVQRCLED MSILITTYEG THNHPLPVGA TAMASTASAA
301: ASFMLVDSSI SPLLNHNSNL NQPLNFPNYH HNLAPNYHHS SSSSPYNNFS NLRTNILNSS DPNNSSQGNL VLDLTKNMSN NNHQFPFASS SSNNHEIGHS
401: NWMSKLSNYE GNNLFSGPKL QGEHNNNNNN NNNIPPMLAH ENMSAIASDP KFRVAVAAAI SSLINKDQSH STGES

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.