Factsheet for Solyc07g051840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038852	Potato	nucleus	80.82	91.56
VIT_12s0059g00880.t01	Wine grape	nucleus	58.8	62.56
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	31.38	56.57
Solyc02g032950.2.1	Tomato	nucleus	43.42	55.02
GSMUA_Achr5P16750_001	Banana	nucleus	42.31	54.94
GSMUA_Achr3P03090_001	Banana	nucleus	32.49	53.66
KRH22585	Soybean	nucleus	51.82	53.26
Solyc02g080890.2.1	Tomato	nucleus	46.12	52.91
GSMUA_Achr10P...	Banana	nucleus	41.52	52.82
GSMUA_Achr6P13630_001	Banana	nucleus	42.31	50.95
KRH25355	Soybean	nucleus	48.65	50.0
GSMUA_Achr2P15200_001	Banana	nucleus	42.0	49.81
KRH56160	Soybean	nucleus	49.29	49.52
GSMUA_Achr6P05880_001	Banana	nucleus	37.08	49.16
GSMUA_Achr10P...	Banana	nucleus	39.14	48.43
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	34.71	44.88
TraesCS3A01G167200.1	Wheat	nucleus	35.97	39.48
TraesCS3B01G199000.2	Wheat	nucleus	36.13	39.31
Zm00001d039245_P001	Maize	nucleus	33.44	39.0
EES02155	Sorghum	nucleus	34.07	37.72
Solyc12g042590.1.1	Tomato	nucleus	12.68	37.04
HORVU3Hr1G033740.2	Barley	nucleus, plastid	36.13	36.25
TraesCS3D01G173300.2	Wheat	plastid	36.13	35.85
Solyc08g067360.2.1	Tomato	nucleus	13.63	33.33
Solyc03g113120.2.1	Tomato	nucleus	26.47	31.87
Solyc08g067340.2.1	Tomato	nucleus	12.52	31.23
Solyc05g007110.2.1	Tomato	nucleus	19.18	30.87
Solyc06g068460.2.1	Tomato	nucleus	17.43	30.56
Solyc01g104550.2.1	Tomato	nucleus	21.55	28.63
Solyc02g067430.2.1	Tomato	nucleus	19.65	28.18
Solyc03g116890.2.1	Tomato	nucleus	15.06	27.14
Solyc06g070990.2.1	Tomato	nucleus	26.31	25.58
Os01t0246700-01	Rice	nucleus	15.69	23.97

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4CF86	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF21	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc07g051840.2
EnsemblPlants:Solyc07g051840.2.1	UniParc:UPI000276B456	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chr7:+:60362033..60365327

Molecular Weight (calculated)

68833.7 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.800

Length

631 amino acids

Sequence
(BLAST)

001: MAKGSGLSFD PDPIKPIPIV LNSFLEPHNN QFYPKNKFFY NLTSMESSYN NRSPPPTIQF PVNLNCSTTT THHHDHDHDH DHQDQQQHHI RPVIDEMDFF
101: AEKKNATNPD DPTTANDTDR KESNTTTTPP ELDFNINTAL HLLTANTYTD QSIMDDSLSP NSDDKRIKNE LVVLQAELER MNGENRRLRD MLNQVKNNYN
201: TLQVHMMTMM HQQQQNQESG QRDGKNEEVK HQQHNNQNGH GGGQVVPRQF MDLGLAAGAG GTASEAEEAS LSSSEGPSGR EKSRSPVNNI ESSSTCGIVR
301: EDSPEKVSPG WGPNKIPRLG NTSTNNKPAD QATEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ VQRCAEDRTI
401: LITTYEGTHN HPLPPAAIAM ASTTSSAAKM LLSGSMPSAD GLMNSNFFAR TLLPCSSSMA TISASAPFPT VTLDLTQSPN PLQFPRPPNQ FQIPFSNPPH
501: NNILANPAAL LPQIFGQALY NQSKFSGLQS SQDLEGQQHP STMPSSINPS NHNPVADTVN ALTSDPNFTA ALAAAITSLI GNPGQPNNGT NNTIATTTTP
601: ANNNNNSVTS NGNNNNNGSN NKVTNSSFPA N

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.