Factsheet for Solyc05g007110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89544	Soybean	nucleus	22.7	54.6
Zm00001d045375_P001	Maize	nucleus	22.19	34.8
Solyc02g067430.2.1	Tomato	nucleus	33.93	30.23
Solyc03g113120.2.1	Tomato	nucleus	39.03	29.2
VIT_01s0026g01730.t01	Wine grape	nucleus	44.13	29.12
KRH74791	Soybean	nucleus	36.99	28.49
KRH69334	Soybean	nucleus	38.01	28.27
TraesCS3B01G130000.1	Wheat	nucleus	35.2	28.16
TraesCS3D01G113300.1	Wheat	nucleus	34.95	27.85
KRG99150	Soybean	nucleus	36.73	27.22
Os01t0185900-01	Rice	nucleus	34.18	26.43
KRH33270	Soybean	nucleus	20.15	25.9
HORVU3Hr1G020210.2	Barley	nucleus	34.69	25.86
TraesCS7D01G092500.2	Wheat	nucleus	38.52	25.55
Zm00001d008794_P001	Maize	nucleus	34.95	25.37
Os06t0146250-00	Rice	nucleus	39.03	25.33
EES02331	Sorghum	nucleus	35.2	25.18
TraesCS7D01G092600.1	Wheat	nucleus	38.78	25.12
Solyc12g042590.1.1	Tomato	nucleus	13.78	25.0
Zm00001d039532_P001	Maize	nucleus	34.18	24.5
Solyc01g104550.2.1	Tomato	nucleus	29.34	24.21
OQU75809	Sorghum	nucleus	38.52	24.16
HORVU7Hr1G021260.1	Barley	nucleus	37.5	24.14
Solyc08g067340.2.1	Tomato	nucleus	15.31	23.72
Solyc06g070990.2.1	Tomato	nucleus	39.03	23.57
Solyc02g032950.2.1	Tomato	nucleus	29.59	23.29
Solyc08g067360.2.1	Tomato	nucleus	15.31	23.26
Solyc02g080890.2.1	Tomato	nucleus	31.63	22.55
TraesCS7D01G092400.1	Wheat	nucleus	34.69	22.48
TraesCS7D01G092300.1	Wheat	nucleus	34.44	22.31
Solyc06g068460.2.1	Tomato	nucleus	19.39	21.11
Solyc03g116890.2.1	Tomato	nucleus	17.86	20.0
Solyc07g051840.2.1	Tomato	nucleus	30.87	19.18

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	UniProt:K4BWN7	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc05g007110.2
EnsemblPlants:Solyc05g007110.2.1	UniParc:UPI0002765A92	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chr5:+:1679764..1683310

Molecular Weight (calculated)

44416.1 Da

IEP (calculated)

8.773

GRAVY (calculated)

-0.851

Length

392 amino acids

Sequence
(BLAST)

001: MLRKDRAMDS TKKDEDKLNS TKCEIYEAKE ENERLKRMLS KMMNDYKSLE MYFQGILTQK NTKNIIATSN NIHEEKEQVE LVSLSLGRNS STSRELIKKE
101: LLYDDQNKSN KNHSKLLFDG LELGLGCKFT QENSFEGPKK ENINNERRVL IQNYLPSDYC GEEFLQQIPQ KKARVSIRAV CDTITMNDGC QWRKYGQKIA
201: KGNPCPRAYY RCTVSPSCPV RKQVQRCSKD TSILTTTYEG THNHPLPFSA TDMASTTSAA ASMLRCTSTS STSQQFLPNI DQNLHGKINF TNNTSNNNLL
301: LATHNNSPTF YLPKTSISTS QSHPTITLDF TTNSSSTNSS SSNSYSTLCN NIKSEIGPSS YLGRPCYSNQ PYITSKEQSE HDRSVQCRSQ NF

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.