Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G130000.1 | Wheat | nucleus | 89.54 | 96.12 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 89.54 | 95.73 |
| CDX86714 | Canola | nucleus | 12.74 | 78.82 |
| Os01t0185900-01 | Rice | nucleus | 63.69 | 66.08 |
| Zm00001d008794_P001 | Maize | nucleus | 53.04 | 51.67 |
| KRG89544 | Soybean | nucleus | 15.78 | 50.92 |
| EES02331 | Sorghum | nucleus | 53.04 | 50.91 |
| Zm00001d039532_P001 | Maize | nucleus | 52.09 | 50.09 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 32.32 | 42.39 |
| CDY26717 | Canola | nucleus | 19.96 | 36.59 |
| Bra025693.1-P | Field mustard | nucleus | 19.96 | 36.59 |
| PGSC0003DMT400017859 | Potato | nucleus | 30.61 | 36.34 |
| Solyc02g067430.2.1 | Tomato | nucleus | 30.23 | 36.14 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 34.22 | 35.86 |
| KRH63398 | Soybean | nucleus | 36.12 | 35.78 |
| Solyc05g007110.2.1 | Tomato | nucleus | 25.86 | 34.69 |
| Solyc03g113120.2.1 | Tomato | nucleus | 34.03 | 34.16 |
| PGSC0003DMT400046570 | Potato | nucleus | 34.03 | 34.1 |
| VIT_01s0026g01730.t01 | Wine grape | nucleus | 38.02 | 33.67 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 38.78 | 33.5 |
| CDX69548 | Canola | nucleus | 27.38 | 33.33 |
| Bra031053.1-P | Field mustard | nucleus | 29.66 | 33.19 |
| Bra016535.1-P | Field mustard | nucleus | 29.85 | 33.12 |
| CDX85563 | Canola | nucleus | 19.39 | 32.9 |
| KRG93506 | Soybean | nucleus | 30.61 | 32.86 |
| Bra006283.1-P | Field mustard | nucleus | 32.89 | 32.83 |
| KRH56941 | Soybean | nucleus | 34.79 | 32.74 |
| KRH03442 | Soybean | nucleus | 37.26 | 32.67 |
| CDX78611 | Canola | nucleus | 32.7 | 32.64 |
| CDX70593 | Canola | nucleus | 32.51 | 32.51 |
| CDY63770 | Canola | nucleus | 31.75 | 32.49 |
| AT1G18860.1 | Thale cress | nucleus | 32.51 | 32.39 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 37.07 | 32.23 |
| Bra023505.1-P | Field mustard | nucleus | 31.37 | 31.98 |
| AT5G15130.1 | Thale cress | nucleus | 33.08 | 31.75 |
| KRH54509 | Soybean | nucleus | 37.07 | 31.71 |
| CDX96692 | Canola | nucleus | 30.99 | 31.53 |
| CDX83804 | Canola | nucleus | 30.8 | 31.46 |
| KRH74791 | Soybean | nucleus | 30.42 | 31.43 |
| CDX69549 | Canola | nucleus | 32.89 | 31.4 |
| CDX85052 | Canola | nucleus | 32.7 | 31.27 |
| Bra008719.1-P | Field mustard | nucleus | 32.7 | 31.22 |
| KRH01137 | Soybean | nucleus | 31.94 | 31.05 |
| CDX81900 | Canola | nucleus | 30.61 | 31.02 |
| CDY21693 | Canola | nucleus | 30.61 | 31.02 |
| KRH40121 | Soybean | nucleus | 31.75 | 30.87 |
| CDY28692 | Canola | nucleus | 31.18 | 30.48 |
| KRH33270 | Soybean | nucleus | 17.49 | 30.16 |
| Bra040505.1-P | Field mustard | nucleus | 30.61 | 30.09 |
| KRH69334 | Soybean | nucleus | 29.85 | 29.79 |
| KRG99150 | Soybean | nucleus | 29.09 | 28.92 |
| Solyc06g070990.2.1 | Tomato | nucleus | 35.36 | 28.66 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 9.32 | 28.16 |
| CDY19255 | Canola | nucleus | 11.6 | 25.63 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 14.45 | 23.82 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 27.38 | 22.89 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 15.21 | 22.66 |
| Bra025692.1-P | Field mustard | nucleus | 9.89 | 21.58 |
| CDY72612 | Canola | nucleus | 9.89 | 21.58 |
| HORVU6Hr1G079710.2 | Barley | nucleus | 25.1 | 21.29 |
| CDX86713 | Canola | nucleus | 4.56 | 20.34 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 14.64 | 18.97 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 13.69 | 18.41 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A287KCY9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU3Hr1G020210 | EnsemblPlants:HORVU3Hr1G020210.2 | InterPro:IPR003657 |
| InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF37 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI000B45FF91 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:-:62169508..62172594
Molecular Weight (calculated)
55070.7 Da
IEP (calculated)
8.264
GRAVY (calculated)
-0.323
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVGVERPPP VKEENKPDTM QVYIHIICSF SCVGHSSLRS SWKLISFKLF GLQIGSALPM VLESFPSTQR NSIATSKDDK LEATKAEMGE VREENERLKT
101: LLSHIVRDYQ SLQTHFHDAV KVKQQAPAAD KLPAASTPAP TADDLVSLSL GSGGYSRPKG AHQRSLSSSS SGTETDPDDQ LSLGLSSRRS TDGDDRQAAR
201: PSATPLMNLS SDSSADDTAA PGHDLPAAAC PTATKARKSP GAGVDGADDE VLQQQAKKAR VSVRVKCDTP TMNDGCQWRK YGQKISKGNP CPRAYYRCTV
301: APSCPVRKQV QRCADDMSIL ITTYEGTHSH PLPPAAAAMA STTSAAASML LAGSSSSSSH GHHLPFASAG LLGPTTISTI ASCPTVTLDL TAPHSLMQQQ
401: YQSPYAAAMA AGYESKALPA AWSSGYLAPY GGGLPFYGKS SLPAMGQHFG LGMATTRTEQ LYGAAHSSSY LQRTSSGGVV HGAPAAAPAV TDTIAKAITS
501: DPSFQSVLAA AITSYMGRGA GAAAHK
101: LLSHIVRDYQ SLQTHFHDAV KVKQQAPAAD KLPAASTPAP TADDLVSLSL GSGGYSRPKG AHQRSLSSSS SGTETDPDDQ LSLGLSSRRS TDGDDRQAAR
201: PSATPLMNLS SDSSADDTAA PGHDLPAAAC PTATKARKSP GAGVDGADDE VLQQQAKKAR VSVRVKCDTP TMNDGCQWRK YGQKISKGNP CPRAYYRCTV
301: APSCPVRKQV QRCADDMSIL ITTYEGTHSH PLPPAAAAMA STTSAAASML LAGSSSSSSH GHHLPFASAG LLGPTTISTI ASCPTVTLDL TAPHSLMQQQ
401: YQSPYAAAMA AGYESKALPA AWSSGYLAPY GGGLPFYGKS SLPAMGQHFG LGMATTRTEQ LYGAAHSSSY LQRTSSGGVV HGAPAAAPAV TDTIAKAITS
501: DPSFQSVLAA AITSYMGRGA GAAAHK
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.