Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78611 | Canola | nucleus | 96.96 | 96.77 |
| CDX86714 | Canola | nucleus | 13.31 | 82.35 |
| AT5G15130.1 | Thale cress | nucleus | 85.36 | 81.93 |
| CDX69549 | Canola | nucleus | 85.55 | 81.67 |
| CDX85052 | Canola | nucleus | 84.79 | 81.09 |
| CDY63770 | Canola | nucleus | 79.09 | 80.93 |
| CDX69548 | Canola | nucleus | 66.16 | 80.56 |
| CDX85563 | Canola | nucleus | 40.49 | 68.71 |
| CDY28692 | Canola | nucleus | 60.84 | 59.48 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 42.78 | 44.82 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 26.62 | 42.94 |
| Solyc02g067430.2.1 | Tomato | nucleus | 35.55 | 42.5 |
| PGSC0003DMT400017859 | Potato | nucleus | 35.36 | 41.99 |
| KRG93506 | Soybean | nucleus | 38.78 | 41.63 |
| CDY26717 | Canola | nucleus | 22.05 | 40.42 |
| Zm00001d045375_P001 | Maize | nucleus | 19.2 | 40.4 |
| KRH01137 | Soybean | nucleus | 40.3 | 39.19 |
| KRH40121 | Soybean | nucleus | 39.54 | 38.45 |
| CDX97845 | Canola | nucleus | 17.11 | 37.34 |
| CDY11652 | Canola | nucleus | 25.67 | 35.25 |
| CDX81900 | Canola | nucleus | 34.41 | 34.87 |
| CDY68857 | Canola | nucleus | 24.52 | 34.86 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 32.13 | 34.49 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 39.54 | 34.38 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 32.13 | 34.35 |
| CDY21693 | Canola | nucleus | 33.84 | 34.3 |
| CDX81493 | Canola | nucleus | 20.15 | 34.19 |
| CDX83804 | Canola | nucleus | 33.46 | 34.17 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 39.16 | 34.05 |
| CDX96692 | Canola | nucleus | 33.46 | 34.04 |
| Os01t0185900-01 | Rice | nucleus | 32.7 | 33.92 |
| Os06t0146250-00 | Rice | nucleus | 38.4 | 33.44 |
| CDY56082 | Canola | nucleus | 24.33 | 33.42 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 32.51 | 32.51 |
| OQU75809 | Sorghum | nucleus | 38.4 | 32.32 |
| CDY01891 | Canola | nucleus | 19.58 | 31.4 |
| Zm00001d008794_P001 | Maize | nucleus | 32.13 | 31.3 |
| CDX96044 | Canola | nucleus | 19.39 | 31.1 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 35.74 | 31.07 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 34.03 | 30.29 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 34.79 | 30.05 |
| Zm00001d039532_P001 | Maize | nucleus | 31.18 | 29.98 |
| EES02331 | Sorghum | nucleus | 31.18 | 29.93 |
| CDX72327 | Canola | nucleus | 16.16 | 29.82 |
| CDY22006 | Canola | nucleus | 27.19 | 29.18 |
| CDY07121 | Canola | nucleus | 27.19 | 28.89 |
| CDX75196 | Canola | nucleus | 15.21 | 28.27 |
| CDX94553 | Canola | nucleus | 25.48 | 27.29 |
| CDY67287 | Canola | nucleus | 15.02 | 27.24 |
| CDY22299 | Canola | nucleus | 15.02 | 27.24 |
| CDY16669 | Canola | nucleus | 25.48 | 27.24 |
| CDY39879 | Canola | nucleus | 15.78 | 27.04 |
| CDX68787 | Canola | nucleus | 15.97 | 26.33 |
| CDX67971 | Canola | nucleus | 14.64 | 25.93 |
| CDX88573 | Canola | nucleus | 14.83 | 25.91 |
| CDX79347 | Canola | nucleus | 14.64 | 25.84 |
| CDX87347 | Canola | nucleus | 14.64 | 25.67 |
| CDY19255 | Canola | nucleus | 11.6 | 25.63 |
| CDX82900 | Canola | nucleus | 25.29 | 25.53 |
| CDX90863 | Canola | nucleus | 24.52 | 25.44 |
| CDY21301 | Canola | nucleus | 24.52 | 25.44 |
| CDY70096 | Canola | nucleus | 16.16 | 24.64 |
| CDY12937 | Canola | nucleus | 25.86 | 24.64 |
| CDY19535 | Canola | nucleus | 25.48 | 24.28 |
| CDY24892 | Canola | nucleus | 23.76 | 23.86 |
| CDY72612 | Canola | nucleus | 10.65 | 23.24 |
| CDY08634 | Canola | nucleus | 21.86 | 22.86 |
| CDX86713 | Canola | nucleus | 3.61 | 16.1 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078C6I8 | EnsemblPlants:CDX70593 | ProteinID:CDX70593 | ProteinID:CDX70593.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00140437001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EC1EB8 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g06770D
Coordinates
chrLK031791:+:1149715..1152189
Molecular Weight (calculated)
56637.5 Da
IEP (calculated)
6.626
GRAVY (calculated)
-0.612
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLLKLPTS DSLLKDKVLG SAQILEASKG DDDHQELESA KAEMSEVKEE NEKLKGMLER IESDYKSLKL RFFDIVQQEP SNNLTRDQNV NGLQKATTDL
101: SSFDQEHELV SLSLGRRSSS PSDNTSKKED KEVNADEELT KAGLTLGFSN GSLSSQENSS GETWPSGKVT GKRSSPAPAS GGDVEGEAGQ QNNVKRARVC
201: VRARCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CADDMSILIT TYEGTHSHPL PLSATTMAST TSAAASMLLS GSSSSSSSAA
301: EMIGNNLYDN SRFINNKSFY SPTLHSPLHP TVTLDLTTPQ HSSSSSLPSL NFNKYSNSFQ NFPSTSLNFS SNPSLSSSTT LSIPTVWGSG YSSYNPYPYN
401: NVQFGTSNQG KTVQNSMSLT ETLTKALTSD PSFQTVIAAA ISSMVGSNGE KQIVNPISNN VQQTATTNNI KGCGSYFSSL LMSNIVANNQ TGASLDQPPS
501: QPPLSMFKNS SSSSSTTSFV NKEEKS
101: SSFDQEHELV SLSLGRRSSS PSDNTSKKED KEVNADEELT KAGLTLGFSN GSLSSQENSS GETWPSGKVT GKRSSPAPAS GGDVEGEAGQ QNNVKRARVC
201: VRARCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CADDMSILIT TYEGTHSHPL PLSATTMAST TSAAASMLLS GSSSSSSSAA
301: EMIGNNLYDN SRFINNKSFY SPTLHSPLHP TVTLDLTTPQ HSSSSSLPSL NFNKYSNSFQ NFPSTSLNFS SNPSLSSSTT LSIPTVWGSG YSSYNPYPYN
401: NVQFGTSNQG KTVQNSMSLT ETLTKALTSD PSFQTVIAAA ISSMVGSNGE KQIVNPISNN VQQTATTNNI KGCGSYFSSL LMSNIVANNQ TGASLDQPPS
501: QPPLSMFKNS SSSSSTTSFV NKEEKS
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.